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MASQOT-GUI is an open-source, platform-independent application for two-channel microarray spot quality control. Included is a set of tools for gridding, segmentation, quantification, multivariate spot quality assessment and data visualization.
Daffodil Replicator is a powerful Open Source Java tool for data integration, data migration and data protection in real time. It allows bi-directional data replication and synchronization between homogeneous / heterogeneous databases including Oracle, M
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PROMPT is a system for retrieval, analysis, mapping and comparison of proteins. It allows easy mapping of different types of sequence IDs, data retrieval and integration, a multitude of analysis and comparison algorithms and a full-blown easy to use GUI.
Osprey is a software platform for visualization of complex interaction networks. Osprey builds data-rich graphical represetations from Gene Ontology (GO) annotated interactions maintained by the BioGRID.
JGP is a GUI for gnuplot (http://www.gnuplot.info/).
It is made for all those who just love gnuplot but who found
that organizing a large number of datasets and plots from the command line is inconvenient.
JGP uses gnuplot as plotting engine.
Software Development Toolkit and Libraries to support the adoption of MIMOSA and Open O&M Initiatives. The libraries and toolkits will focus on basic implementation of DAO, XML, and Web Service tools.
TopicMapTools allows the creation, manipulation and visualization of XML Topic Maps. It is based on the TM4J framework. The editor can be used in genealogy for the visualisation of e.g. family trees.
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Code libraries and media files contributed by Whoola, Inc. Includes Whoola Cyberspace, a virtual reality web browser with fly-through hyperlinks. The source code includes a COLLADA loader for Xith. Click on the "Home Page" link above to install.
J-gramS is a diagram editor that uses Java and SWT. Similar to idraw and xfig it focuses on creating diagrams easily without a complicated user interface. Diagrams produced by J-gramS are saved as SVG or a number of image formats.
SenseRank Sys:
- builds the dictionaries (multidim matrices) of words’ values;
- for the set utterance in certain language builds a figure in multidimensional space (in the matrix space) of values (visual schema), which is topological view of sense
Viperfish is intended for the sailor looking to improve his weather forecasting. Viperfish provides the ability to visualise and modify GRIB (weather prediction) files, it can plot routes and provides routing based on coming weather and boat performance.
This software system serves as both a DICOM image viewer as well as a diagramming tool for collaborating notes on the given image sets. This my Computer Science graduate thesis project at Loyola Marymount University.
DSIllustrator is a light-weight editor for making illustrations of data structures. It is used to make graphics of instances of basic data structure (trees, graphs, lists, stacks, etc) in very short time, to be used in lecture slides and typed homeworks.
The goal of this project is to be an improvement of the original Network Animator (NAM) module provided as part of the Network Simulator 2 (NS2). This tool provides topology visualization, TCL script generation, and enhanced simulation animation.
JDMF is a data mining framework written in Java. Main features include: simplicity, flexibility, many algorithms to choose from, many formats of input (e.g. XML, CSV, JDBC, Java beans) and output data (e.g. XML, plain text info, charts).
Hyperview3d allows the visualization of hyperbolic geometry models. Specifically the Klein , Poincare , Weierstrass and Gans model. It allows switching between one model to the other and user defined texture mapping onto the 3D model.
The MatrixBrowser project presents a new approach for visualizing and exploring large networked information structures which may represent, for instance, linked information resources or metadata structures such as ontologies.