Search Results for "algorithms" - Page 2
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Showing 209 open source projects for "algorithms"
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LatticeQCD.jl
A native Julia code for lattice QCD with dynamical fermions in 4D
This code enables you to perform lattice QCD calculations! A native Julia code for Lattice QCD. -
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ImplicitDifferentiation.jl
Automatic differentiation of implicit functions
...Reasons can vary depending on your backend, but the most common include calls to external solvers, mutating operations or type restrictions. Those for which automatic differentiation is very slow. A common example is iterative procedures like fixed point equations or optimization algorithms. -
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EvoTrees.jl
Boosted trees in Julia
A Julia implementation of boosted trees with CPU and GPU support. Efficient histogram-based algorithms with support for multiple loss functions, including various regressions, multi-classification and Gaussian max likelihood. -
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XGBoost
Scalable and Flexible Gradient Boosting
...It supports regression, classification, ranking and user defined objectives, and runs on all major operating systems and cloud platforms. XGBoost works by implementing machine learning algorithms under the Gradient Boosting framework. It also offers parallel tree boosting (GBDT, GBRT or GBM) that can quickly and accurately solve many data science problems. XGBoost can be used for Python, Java, Scala, R, C++ and more. It can run on a single machine, Hadoop, Spark, Dask, Flink and most other distributed environments, and is capable of solving problems beyond billions of examples. -
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CausalityTools.jl
Algorithms for detecting associations, dynamical influences
CausalityTools.jl is a package for quantifying associations and dynamical coupling between datasets, independence testing, and causal inference. Association measures from conventional statistics, information theory, and dynamical systems theory, for example, distance correlation, mutual information, transfer entropy, convergent cross mapping and a lot more. A dedicated API for independence testing, which comes with automatic compatibility with every measure-estimator combination you can... -
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QuantumClifford.jl
Clifford circuits, graph states, and other quantum Stabilizer tools
...The package is already very fast for the majority of common operations, but there are still many low-hanging fruits performance-wise. See the detailed suggested readings & references page for background on the various algorithms. -
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Matplot++
Matplot++: A C++ Graphics Library for Data Visualization
...Matplot++ is a graphics library for data visualization that provides interactive plotting, means for exporting plots in high-quality formats for scientific publications, a compact syntax consistent with similar libraries, dozens of plot categories with specialized algorithms, multiple coding styles, and supports generic backends. -
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Circuitscape.jl
Algorithms from circuit theory to predict connectivity
Circuitscape is an open-source program that uses circuit theory to model connectivity in heterogeneous landscapes. Its most common applications include modeling the movement and gene flow of plants and animals, as well as identifying areas important for connectivity conservation. The new Circuitscape is built entirely in the Julia language, a new programming language for technical computing. Julia is built from the ground up to be fast. As such, this offers a number of advantages over the... -
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InMemoryDatasets.jl
Multithreaded package for working with tabular data in Julia
InMemoryDatasets.jl is a multithreaded package for data manipulation and is designed for Julia 1.6+ (64-bit OS). The core computation engine of the package is a set of customized algorithms developed specifically for columnar tables. -
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nw_wrld
nw_wrld is an event-driven sequencer for triggering visuals
nw_wrld is a procedurally generated world-building engine tailored for game developers and interactive storytellers who want to craft rich, random yet coherent environments without hand-crafting every detail. It uses noise functions and modular terrain algorithms to generate expansive maps, diverse biomes, and layered features like rivers, mountain ranges, forests, and resource nodes. The system is designed to be extensible, letting developers plug in new generation rules or tweak parameters with real-time previews so they can iterate rapidly on world design. It also includes utilities to derive metadata from worlds, such as climate distributions, strategic points of interest, and navigable paths, which can be consumed by gameplay systems or AI agents. ... -
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DynamicalSystems.jl
Award winning software library for nonlinear dynamics timeseries
...To learn how to use it and see its contents visit the documentation, which you can either find online or build locally by running the docs/make.jl file. DynamicalSystems.jl is part of JuliaDynamics, an organization dedicated to creating high-quality scientific software. All implemented algorithms provide a high-level scientific description of their functionality in their documentation string as well as references to scientific papers. The documentation features hundreds of tutorials and examples ranging from introductory to expert usage. -
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Digital Earth Australia notebooks
Repository for Digital Earth Australia Jupyter Notebooks
The knowledge hub brings together information about Digital Earth Australia’s products and services, allowing you to utilize our free and open-source satellite imagery archive. Browse our catalog of data products to find supporting information and ways to access the data. The Digital Earth Australia notebooks and tools repository (dea-notebooks) hosts Jupyter Notebooks, Python scripts and workflows for analyzing Digital Earth Australia (DEA) satellite data and derived products. This... -
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Coluna.jl
Branch-and-Price-and-Cut in Julia
...You write an original MIP that models your problem using the JuMP modeling language and our specific extension BlockDecomposition offers a syntax to specify the problem decomposition. Then, Coluna reformulates the original MIP and optimizes the reformulation using the algorithms you choose. Coluna aims to be very modular and tweakable so that you can define the behavior of your customized branch-and-price-and-cut algorithm. -
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WordCloud.jl
Word cloud generator in julia
...Each word appears only once, and its font size is determined solely by the provided weight. Words are never repeated or shrunk artificially to fill empty spaces. It utilizes intelligent strategies and efficient nesting algorithms, implemented entirely in Julia (see Stuffing.jl). As a result, it can easily generate high-resolution word clouds. -
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PySR
High-Performance Symbolic Regression in Python and Julia
...Over a period of several years, PySR has been engineered from the ground up to be (1) as high-performance as possible, (2) as configurable as possible, and (3) easy to use. PySR is developed alongside the Julia library SymbolicRegression.jl, which forms the powerful search engine of PySR. The details of these algorithms are described in the PySR paper. Symbolic regression works best on low-dimensional datasets, but one can also extend these approaches to higher-dimensional spaces by using "Symbolic Distillation" of Neural Networks, as explained in 2006.11287, where we apply it to N-body problems. Here, one essentially uses symbolic regression to convert a neural net to an analytic equation. ... -
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Optimization.jl
Mathematical Optimization in Julia
...It enables rapid prototyping and experimentation with minimal syntax overhead by providing a uniform interface to >25 optimization libraries, hence 100+ optimization solvers encompassing almost all classes of optimization algorithms such as global, mixed-integer, non-convex, second-order local, constrained, etc. It allows you to choose an Automatic Differentiation (AD) backend by simply passing an argument to indicate the package to use and automatically generates the efficient derivatives of the objective and constraints while giving you the flexibility to switch between different AD engines as per your problem. ... -
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PDFIO.jl
PDF Reader Library for Native Julia.
PDFIO is a native Julia implementation for reading PDF files. It's a 100% Julia implementation of the PDF specification. Other than a few well-established algorithms like flate decode (zlib library) or cryptographic operations (OpenSSL library) almost all of the APIs are written in native Julia. PDF files are in existence for over three decades. Implementations of the PDF writers are not always to the specification or they may even vary significantly from vendor to vendor. Every time, you get a new PDF file there is a possibility that it may not work to the best interpretation of the specification. ... -
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Cleanlab
The standard data-centric AI package for data quality and ML
...To facilitate machine learning with messy, real-world data, this data-centric AI package uses your existing models to estimate dataset problems that can be fixed to train even better models. cleanlab cleans your data's labels via state-of-the-art confident learning algorithms, published in this paper and blog. See some of the datasets cleaned with cleanlab at labelerrors.com. This package helps you find label issues and other data issues, so you can train reliable ML models. All features of cleanlab work with any dataset and any model. Yes, any model: PyTorch, Tensorflow, Keras, JAX, HuggingFace, OpenAI, XGBoost, scikit-learn, etc. ... -
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awesome-single-cell
Community-curated list of software packages and data resources
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc. List of software packages (and the people developing these methods) for single-cell data analysis, including RNA-seq, ATAC-seq, etc. Rapid, accurate and memory-frugal preprocessing of single-cell and single-nucleus RNA-seq data. Find bimodal, unimodal, and multimodal features in your data. Ascend is an R package comprised of fast, streamlined analysis functions optimized to... -
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NonlinearSolve.jl
High-performance and differentiation-enabled nonlinear solvers
Fast implementations of root-finding algorithms in Julia that satisfy the SciML common interface. For information on using the package, see the stable documentation. Use the in-development documentation for the version of the documentation that contains the unreleased features. NonlinearSolve.jl is a unified interface for the nonlinear solving packages of Julia. The package includes its own high-performance nonlinear solvers which include the ability to swap out to fast direct and iterative linear solvers, along with the ability to use sparse automatic differentiation for Jacobian construction and Jacobian-vector products. ... -
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Luigi
Python module that helps you build complex pipelines of batch jobs
...You want to chain many tasks, automate them, and failures will happen. These tasks can be anything, but are typically long running things like Hadoop jobs, dumping data to/from databases, running machine learning algorithms, or anything else. You can build pretty much any task you want, but Luigi also comes with a toolbox of several common task templates that you use. It includes support for running Python mapreduce jobs in Hadoop, as well as Hive, and Pig, jobs. It also comes with file system abstractions for HDFS, and local files that ensures all file system operations are atomic. -
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Iterative Solvers
Iterative algorithms for solving linear systems, eigensystems
IterativeSolvers is a Julia package that provides iterative algorithms for solving linear systems, eigensystems, and singular value problems. -
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MOA - Massive Online Analysis
Big Data Stream Analytics Framework.
A framework for learning from a continuous supply of examples, a data stream. Includes classification, regression, clustering, outlier detection and recommender systems. Related to the WEKA project, also written in Java, while scaling to adaptive large scale machine learning. -
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SMILI
Scientific Visualisation Made Easy
...The main sMILX application features for viewing n-D images, vector images, DICOMs, anonymizing, shape analysis and models/surfaces with easy drag and drop functions. It also features a number of standard processing algorithms for smoothing, thresholding, masking etc. images and models, both with graphical user interfaces and/or via the command-line. See our YouTube channel for tutorial videos via the homepage. The applications are all built out of a uniform user-interface framework that provides a very high level (Qt) interface to powerful image processing and scientific visualisation algorithms from the Insight Toolkit (ITK) and Visualisation Toolkit (VTK). ... -
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Euler Math Toolbox
Numerical and Symbolic Math Tool
...Euler supports Latex for math display, Povray for photo-realistic 3D scenes, Python, Matplotlib and C for scripting, and contains a full programming language. Features include libraries for numerical algorithms, optimization, plotting in 2D and 3D, graphics export, a complete help system, tutorials and examples. Euler runs in Windows natively, or in Linux via Wine. It is completely free of royalties. The source is licensed under GPL.
