Showing 162 open source projects for "contiki version 3"

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  • 1
    Jmol

    Jmol

    An interactive viewer for three-dimensional chemical structures.

    Over 1,000,000 page views per month. Jmol/JSmol is a molecular viewer for 3D chemical structures that runs in four independent modes: an HTML5-only web application utilizing jQuery, a Java applet, a stand-alone Java program (Jmol.jar), and a "headless" server-side component (JmolData.jar). Jmol can read many file types, including PDB, CIF, SDF, MOL, PyMOL PSE files, and Spartan files, as well as output from Gaussian, GAMESS, MOPAC, VASP, CRYSTAL, CASTEP, QuantumEspresso, VMD, and many other...
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    Downloads: 988 This Week
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  • 2
    A "gumbo" of tools and concepts supporting rich client applications with 2D/3D user interfaces. Expands on the code from the book "3D User Interfaces with Java 3D", and includes a generous contribution of RCP code from Meyer Sound. Recent work includes a Norden bombsight simulator, with terrain rendering based on NASA's WorldWind SDK. For this effort YourKit has generously made available its full-featured Java Profiler (https://www.yourkit.com/java/profiler/index.jsp), which has proved...
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  • 3

    GETL

    ETL engine based on Groovy

    P.S. Dear friends. Repository migration to https://github.com/ascrus/getl . You can download jar file from this site or maven. GETL - based package in Groovy, which automates the work of loading and transforming data. His name is an acronym for «Groovy ETL». GETL is a set of libraries of pre-built classes and objects that can be used to solve problems unpacking, transform and load data into programs written in Groovy, or Java, as well as from any software that supports the work with...
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  • 4

    modnlp-plugins

    External plugins for modnlp/teccli

    This is a general project for modnlp/teccli plugins, with focus on text visualizaton.
    Downloads: 0 This Week
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  • Atera all-in-one platform IT management software with AI agents Icon
    Atera all-in-one platform IT management software with AI agents

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  • 5
    Automatic Report Generator

    Automatic Report Generator

    Generate reports from Java applications directly.

    ...This API also supports BIRT reports, and, in this case, its respective template is required. The project is available on Maven: https://mvnrepository.com/artifact/net.sf.automatic-report-generator Version 3: https://mvnrepository.com/artifact/net.sf.ennahdi.automatic-report-generator Checkout the documentation for both version 2 and version 3: https://sourceforge.net/p/automatic-report-generator/wiki/Home/
    Downloads: 0 This Week
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  • 6
    VANESA
    This project moved to GitHub in 2021 and is available at: https://cbrinkrolf.github.io/VANESA/ This tool is a platform-independent software to create individual pathways and to examine biological networks of distributed, heterogeneous data sources, e.g. KEGG, BRENDA. VANESA also offers Petri net modeling of extended hybrid Petri nets which can be also simulated using the OpenModelica framework.
    Downloads: 0 This Week
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  • 7
    Scanmap3D

    Scanmap3D

    3D Network Traffic Visualisation

    A java-based 3D Visualisation tool for analysing network traffic. Written with jMonkeyEngine.
    Downloads: 0 This Week
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  • 8

    EncCon Tree Visualization

    A Enclosure+Connection technique

    An Enclosure+Connection technique for layout and navigation of Hierarchical Information. The layout uses rectangular enclosure partitioning to ensure the space efficiency, and the navigation is a focus+context navigation technique using semi-transparency approach. Related Publications: https://opus.lib.uts.edu.au/bitstream/10453/4003/3/2005003228.pdf
    Downloads: 0 This Week
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  • 9
    ksqlDB

    ksqlDB

    The database purpose-built for stream processing applications

    ...Capture, process, and serve queries using only SQL. No other languages or services are required. ksqlDB enables you to build event streaming applications leveraging your familiarity with relational databases. Three categories are foundational to building an application: collections, stream processing, and queries. Streams are immutable, append-only sequences of events. They're useful for representing a series of historical facts. Tables are mutable collections of events. They let you represent the latest version of each value per key.
    Downloads: 0 This Week
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    Desktop and Mobile Device Management Software

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  • 10

    ARSystem plugins for Pentaho Kettle

    AR-System step and db plugins for Pentaho Data Integration Kettle V5

    Allows you to write per API to AR-System Server (BMC Remedy Action Request System). Includes two step output, one step input and one database plugin. The step plugins need the database plugin.
    Downloads: 0 This Week
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  • 11
    Relations RCP is a personal wiki style application for knowledge creation and management. Its use is the visualization of terms and concepts and the relations governing these items. Relations is implemented as Eclipse RCP application.
    Downloads: 0 This Week
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  • 12
    DSTK - Data Science TooKit 3

    DSTK - Data Science TooKit 3

    Data and Text Mining Software for Everyone

    DSTK - Data Science Toolkit 3 is a set of data and text mining softwares, following the CRISP DM model. DSTK offers data understanding using statistical and text analysis, data preparation using normalization and text processing, modeling and evaluation for machine learning and algorithms. It is based on the old version DSTK at https://sourceforge.net/projects/dstk2/ DSTK Engine is like R.
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  • 13
    Plots a parameterized family of curves
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  • 14
    As of 2018-06-28, this project has moved to https://github.com/AdamaJava. This copy of the code will remain but all new code updates and releases will be from the new site. Java code developed by the Australian ICGC team for operating on next-generation sequencing data. This code is currently being maintained and expanded by the QIMR Berghofer Genome Informatics team (http://www.qimrberghofer.edu.au/lab/genome-informatics/) More details and documentation can be found on the...
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  • 15

    MOIRAI

    Simple Scientific Workflow System for CAGE Analysis

    Cap analysis of gene expression (CAGE) is a sequencing based technology to capture the 5’ ends of RNAs in a biological sample. After mapping, a CAGE peak on the genome indicates the position of an active transcriptional start site (TSS) and the number of reads correspond to its expression level. CAGE is prominently used in both the FANTOM and ENCODE project. MOIRAI is a compact yet flexible workflow system designed to carry out the main steps in data processing and analysis of CAGE data....
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  • 16
    DataCleaner

    DataCleaner

    Data quality analysis, profiling, cleansing, duplicate detection +more

    DataCleaner is a data quality analysis application and a solution platform for DQ solutions. It's core is a strong data profiling engine, which is extensible and thereby adds data cleansing, transformations, enrichment, deduplication, matching and merging. Website: http://datacleaner.github.io
    Downloads: 4 This Week
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  • 17
    PMM-Lab

    PMM-Lab

    Predictive Microbial Modeling plug-in for KNIME

    PMM-Lab is an open-source extension to the Konstanz Information Miner (KNIME). It consists of three components: • a library of KNIME nodes (called PMM-Lab), • a library of “standard” workflows • an HSQL database.to store experimental data and microbial models. Altogether these components are designed to ease and standardize the statistical analysis of experimental microbial data and the development of predictive microbial models (PMM). Users can apply PMM-Lab to proprietary or public...
    Downloads: 0 This Week
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  • 18
    Visualization of Protein-Ligand Graphs

    Visualization of Protein-Ligand Graphs

    Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools

    NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/
    Downloads: 0 This Week
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  • 19

    Freemind Search Plugin

    Plugin to allow search from multiple Freemind maps

    This is a plugin for FreeMind ( https://sourceforge.net/projects/freemind ) The main app only allows you to search the current open map. This plugin will allow you to search multiple maps for chosen key words. Code now at https://github.com/leonarduk/freemindsearchplugin
    Downloads: 0 This Week
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  • 20

    iSBatch

    Hyearchical Data Processing Plugin for ImageJ

    iSBatch is a Java-based plugin for ImageJ (version 1.49d) or its distribution Fiji. iSBatch is designed for quick evaluation of analysis pipelines and visual exploration of datasets. It is distributed under an open open-source license (GNU General Public License, version 3). The plugin handles the data in a hierarchical fashion based on a source folder containing all data and little guidance provided by the user.
    Downloads: 0 This Week
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  • 21
    Open Information Integration
    ...OpenII has a neutral schema repository for browsing and comparing all sorts of data models. OpenII is built as a Rich Client Platform Application on top of Eclipse 3.x. Developers need to download Eclipse, install the RCP support, the Fatjar plugin and the Delta Pack in one of the 3.x flavors. Release Notes Release Date: Jan 2014 Build Version: 1.0.2666 Notes: 1. Now support for AVRO and HCatalog imports 2. Better support for OWL 3. New OWL and Containing Relationship viewers 4. Added case insensitive option in exact matcher for Harmony
    Downloads: 0 This Week
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  • 22
    scipion-xmipp

    scipion-xmipp

    Image processing framework to integrate EM software packages.

    Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated...
    Downloads: 0 This Week
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  • 23
    Pentaho Data Integration

    Pentaho Data Integration

    Pentaho Data Integration ( ETL ) a.k.a Kettle

    ...Project distribution archive is produced under the assemblies module. Core implementation, database dialog, user interface, PDI engine, PDI engine extensions, PDI core plugins, and integration tests. Maven, version 3+, and Java JDK 1.8 are requisites. Use of the Pentaho checkstyle format (via mvn checkstyle:check and reviewing the report) and developing working Unit Tests helps to ensure that pull requests for bugs and improvements are processed quickly. In addition to the unit tests, there are integration tests that test cross-module operation.
    Downloads: 76 This Week
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  • 24
    Toolboxes for SPM (http://www.fil.ion.ucl.ac.uk/spm/) developed at Freiburg Brain Imaging (http://fbi.uniklinik-freiburg.de/)
    Downloads: 0 This Week
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  • 25

    HEIMDALL

    High-End Interface for Monitoring & spatial Data Analysis using L2Norm

    HEIMDALL, short for High-End Interface for Monitoring and spatial Data Analysis using L2-Norm, is a set of public libraries written in JAVA which contains routines and algorithms for geodetic hardware connection. To observe objects (in general spatial points) continuous, HEIMDALL’s programmable logic arrays can be used to design monitoring systems. For data analysis an interface to the least-squares program JAG3D can be provided. The serial communication with e.g. inclination sensors,...
    Downloads: 0 This Week
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