Search Results for "cluster computing"

Seata is a distributed transaction solution for microservices that provides consistent, cross-service commits without forcing every team to adopt the same persistence model. Its architecture separates responsibilities into a global coordinator and per-service participants, so business services remain decoupled while transactions are orchestrated centrally. Multiple modes are supported—AT (automatic, SQL-based with undo logs), TCC (try-confirm-cancel), Saga (long-running compensation), and...

...RNA-seq analyses typically begin by mapping reads to a reference genome in order to determine the location from which the reads were originated, which is a very time-consuming step. This tool allows bioinformatics researchers to efficiently distribute their mapping tasks over the nodes of a cluster by combining a fast multithreaded spliced aligner (HISAT2) with Apache Hadoop, which is a distributed computing framework for scalable Big Data processing. HSRA currently supports single-end and paired-end read alignments from FASTQ/FASTA datasets. Moreover, our tool uses the Hadoop Sequence Parser (HSP) library (link above) to efficiently read the input datasets stored on the Hadoop Distributed File System (HDFS), being able to process datasets compressed with Gzip and BZip2 codecs.

The Integrative Biology VRE is a web-based graphical user interface and repository that provides an environment where biological simulation experiments can be constructed without the need for any knowledge of unix, cluster computing, or shell scripting.