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Interactive visualization and analysis tool for large, multidimensional data sets. NDVis integrates with databases and allows users to create visualizations by writing queries. It uses dimensional stacking, pixelization, and interaction techniques.
The InfoVis Toolkit is a Interactive Graphics Toolkit written in Java/Swing to ease the development of Information Visualization applications and components.
Graph visualization using hyperbolic geometry (hyperbolic trees, but also general graphs).
Applications cover web site structures, topic maps, organisational charts and wikis.
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jQuantum is a Java program to simulate a quantum computer, to design quantum circuits, and to visualize the execution of quantum algorithms. Another main purpose, however, is to create images in your head, and thereby - understanding.
A Java application used in whole genome analysis to display SNPs in a genomic context. Supplementary data is downloaded from various public data sources on the fly and saved locally in a cache. Custom data can be added as supplementary tracks.
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The purpose of this program is to plot the waveforms of the hydrogen wave function. The program has 4 option's. First, plotting the radial function, second, plotting the radial probability, third, 2d wave function,last, 3d wave function.
Angur is a XML visualization utility which helps users visualize XML files in node graphs as well as generating XML visually, without any XML knowledge.
GmanDA is a GPL software for performing qualitative data analysis on mailing-lists and mboxes. It was developed to ease the work with large scale mailing-list archives taken from Gmane.org
Pure Java implementation of an interactive 3d graph rendering engine and editor using a spring embedder algorithm. Nice looking sterile real time 3d environment. Feel free to extend our project and build something awesome, just let us know please :D
This application is a tree algorithms visualizator. The user can create his own tree of a certain type (among binary, binary search, and red black), his algorithm and then can observe the execution in real time of his algorithm on his tree.
To help math students visualize the prufer code and/or discover anything new about the prufer code not already present. Examples and live applet on webiste.
Sanchay is a collection of tools and APIs for language researchers. It has some implementations of NLP algorithms, some flexible APIs, several user friendly annotation interfaces and Sanchay Query Language for language resources.
List of Widgets for use in industrial or automotive Applications. Dial, Bar Graph, Histogram, Custom shaped button, Needle control, svg images. Dashboard development done in java using org.apache.batik libraries.
A group a subprojects for Data Cleaning projects, mainly as a step of a Data Mining Project. Visit www.datacleaningopensource.com to review our current applications or if you want to add yours. NOTE: PROGRAMMING SKILLS ARE REQUIRED.
Seems to be closely related to Cellular automaton, except this creates a complex pattern from a mathematical function you input. See website for examples/live applets. This program makes use of an old GPL version of the JEP equation parser.
cy2reposition: Cytoscape 2 plugin for layout reuse
CyReposition is an open source Cytoscape Plugin for the reuse of existing Cytoscape network layouts in new Cytoscape projects.
This project migrated to github
https://github.com/matthiaskoenig/cy2reposition
SLEDRIDE: Simplified Learning about Expression Data Running in a Desktop Environment. To provide a general workbench for pipe-lining microarray gene expression data from supervised learning results into unsupervised learning methods.
Chipster is a biologist-friendly analysis software for high-throughput data. It contains over 200 analysis tools for next generation sequencing (NGS), microarray and proteomics data. Users can combine tools in automatic analysis workflows, which can be shared. Chipster's interactive visualizations allow users to select datapoints and create new gene lists. For NGS data Chipster contains a built-in genome browser, which highlights SNPs and automatically indexes BAM files and calculates...