Open Source Java Data Management Systems - Page 21

An IDE for people interested in Machine Vision/Image Processing. Written in Java, using JAI. It allows users to view image data and also provides a drag and drop environment that users can create/execute graphs of JAI operators.

Java classes and packages for digital image processing under ImageJ using the Colt Java API, and an enhanced Plugins Control Panel for ImageJ

This is a collection of different little tools written in MATLAB, JAVA, Python. They all have to to do with Imaging & Microscopy for life science research and related topics or problems. Some of them are meant to be used with ImageJ and MicroManager.

Infomap is a Java component for displaying and manipulating nodal data. It gives the user the ability to visualize large graph or tree structures by means of expanding and collapsing portions of the structure and by easily zooming in and out.

Createinfactl is a Java utility that enables Administrators to fully automate Informatica deployments from the command line by creating thedeployment group control XML file to be used with the pmrep command “deploydeploymentgroup”. Default settings for the control file can be overridden at the command line and works with both static and dynamic deployment groups in the repository. Please review the “Using the Deployment Control File” section in the Informatica Command Reference guide for further help on the deployment control file. This utility supports Informatica PowerCenter versions 8.6.1 onwards and Java 1.6\. This utility also contains JDBC drivers for DB2, SQL Server, Oracle, and Teradata databases.

Dbmetadata is a Java utility that reads the metadata from table(s) in a specified database and creates the Informatica XML to import into the repository. I created this utility when we were migrating to a new platform and needed a quick way to create flatfile and relational sources and targets that matched the DDL of the table. I also needed to use shortcuts. If you use the import table list, it will create one XML file with all of the tables and shortcuts (if a shortcut folder is specified) for the requested output type and database/file type.

A Java utility that uses the Informatica Operations API allowing parameter inputs, trapping of suspended workflows and ability to send an email on failure. This utility extends the functionality of the pmcmd startworkflow and starttask command. If you pass in a parameter file and individual parameters on the command line, a temporary parameter file is created that has the values from the parameter file and appends the individual parameters. The e-mail sent is in HTML format using tables and looks similar to the workflow monitor output.

InfusionMonitor is a suite to sample, store and view the activity of medical infusion pumps. It currently supports Terumo pumps, and includes a TE-372 pumps simulator to try it out without the need for a real pumps network.

The Integrative Biology VRE is a web-based graphical user interface and repository that provides an environment where biological simulation experiments can be constructed without the need for any knowledge of unix, cluster computing, or shell scripting.

InterMine is an open-source data warehouse system tailored for the integration and analysis of complex biological data. It enables researchers to create databases from diverse data sources and provides sophisticated web query tools for data exploration.

iSNS is an interactive neural network simulator written in Java/Java3D. The program is intended to be used in lessons of Neural Networks. The program was developed by students as the software project at Charles University in Prague.

Interlogy - next generation knowledge storage and prezentation system. Gives wide functionality for knwoledge evaluation. Interlogy is the same as forum, wiki, chat, socialnetwork, but all together.

Interna is a billing software able to manage customer- and productrelated data and statistics. The document managment is able to generate the types quotation, order confirmation, delivery note, invoice and credit advice in english and german.

Aim is to extract the information from the cadastral maps which is stored as scanned images. The extracted information is stored using graph representation. Then we convert these infomation in to CityGML format to visualize and communicate.

Patacritism is a project to develop interpretive tools for online humanities.

IntiMap is a convenience tool to run the MS-DOS command-line tool MapPop for selective genotyping. It adds facilities to prepare genotyping data files, manage genotype sets and visualize mapping results (genetic marker maps).

Intrepid Bioinformatic's Integrative Genomics Viewer (IGV) modifications for viewing NGS files on IGV with data located on remote servers, accessed by web services.

This program is for generating 3-D regular grid files from scattered data. It is GUI based, reads scattered data, gets options about how to make the 3-D interpolation.

A VUB (www.vub.ac.be) -student project to simulate an ip/tcp and digital network. The project has ended for this year, files will be released in febr 2004. In october, a new group of students will continue to work on this project.

J-gramS is a diagram editor that uses Java and SWT. Similar to idraw and xfig it focuses on creating diagrams easily without a complicated user interface. Diagrams produced by J-gramS are saved as SVG or a number of image formats.

J3DVN is a framework which facilitates the creation of three dimensional data visualization using Java 3D. It works as a plug-in for Eclipse.

This application is a tree algorithms visualizator. The user can create his own tree of a certain type (among binary, binary search, and red black), his algorithm and then can observe the execution in real time of his algorithm on his tree.

JGP is a GUI for gnuplot (http://www.gnuplot.info/). It is made for all those who just love gnuplot but who found that organizing a large number of datasets and plots from the command line is inconvenient. JGP uses gnuplot as plotting engine.