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CEGA is a highly extendable layout plugin for Cytoscape based on an Evolutionary Algorithm. In contrast to other layout algorithms, CEGA lets users decide which features are important for the visualization of their graphs.
Angur is a XML visualization utility which helps users visualize XML files in node graphs as well as generating XML visually, without any XML knowledge.
The SPASE Web Server is a Jetty based application server that is pre-configured to demonstrate SPASE services and tools. With the web server you can explore a variety of SPASE technologies.
GmanDA is a GPL software for performing qualitative data analysis on mailing-lists and mboxes. It was developed to ease the work with large scale mailing-list archives taken from Gmane.org
Sanchay is a collection of tools and APIs for language researchers. It has some implementations of NLP algorithms, some flexible APIs, several user friendly annotation interfaces and Sanchay Query Language for language resources.
The SPASE Registry Services is a metadata sharing system for Virtual Observatories. It is a collection of servlets that utilize SPASE compliant resource descriptions to provide access to both the metadata and data.
Automata Based Programming Tool for implementing logic for J2SE, J2EE and Sybmian applications. Consists of Java FSM Framework and Eclipse Plugin parts. Plugin implements UML model editor, visual debugger, validator, compiler and interpreter for Eclipse
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Pure Java implementation of an interactive 3d graph rendering engine and editor using a spring embedder algorithm. Nice looking sterile real time 3d environment. Feel free to extend our project and build something awesome, just let us know please :D
CoreMan (Correspondence Management System) is a web-based document and correspondence management system that enables companies and organizations to develop an easily accessible digital document and correspondence archive that can be efficiently managed.
Adapting ADempiere to the Serbian language and accounting standards. Превод Адемпjера, креирање контног плана и додатних модула по РС 33 стандарду за Србију.
This application is a tree algorithms visualizator. The user can create his own tree of a certain type (among binary, binary search, and red black), his algorithm and then can observe the execution in real time of his algorithm on his tree.
A group a subprojects for Data Cleaning projects, mainly as a step of a Data Mining Project. Visit www.datacleaningopensource.com to review our current applications or if you want to add yours. NOTE: PROGRAMMING SKILLS ARE REQUIRED.
An open source data version repository model based on true INSERT only logic. Contains high performance support for data versioning and history. Enables point-in-time query and CDC sourcing including mapping each change to a transaction.
To help math students visualize the prufer code and/or discover anything new about the prufer code not already present. Examples and live applet on webiste.
Seems to be closely related to Cellular automaton, except this creates a complex pattern from a mathematical function you input. See website for examples/live applets. This program makes use of an old GPL version of the JEP equation parser.
Graph polynomials and view prime numbers on a ulam spiral graphing plot. Only integer numbers. Based on an old GPL version of the JEP equation parser. See website for additional examples/live applets Seems to be closely related to Cellular automaton.
Chipster is a biologist-friendly analysis software for high-throughput data. It contains over 200 analysis tools for next generation sequencing (NGS), microarray and proteomics data. Users can combine tools in automatic analysis workflows, which can be shared. Chipster's interactive visualizations allow users to select datapoints and create new gene lists. For NGS data Chipster contains a built-in genome browser, which highlights SNPs and automatically indexes BAM files and calculates coverage.
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JUNG provides a common and extendible language for the modeling, analysis, and visualization of data that can be represented as a graph or network.
New version now available on GitHub: https://github.com/jrtom/jung/releases/tag/jung-2.1
TeNeM (Telecommunications Network Model) is a PostgreSQL schema with PL/pgSQL functions and triggers intended to make with a fiber optic network management. It is also a GIS JUMP plug-in to edit and visualize the data. PostGIS is used to extend Postgre.
Avenzoar is a one-year exploration of renal cell carcinoma morphology and its related single nucleotide polymorphisms (SNPa) as a method of automating diagnosis of cancer by using a computer-aided decision tree controlled by analytical statistics.
SLEDRIDE: Simplified Learning about Expression Data Running in a Desktop Environment. To provide a general workbench for pipe-lining microarray gene expression data from supervised learning results into unsupervised learning methods.
Jipes provides open source Java APIs deeply integrated into the Oracle RDBMS, including an Ant task for building and exporting database objects. A Java Data Cartridge replacing database links is also in process.
OntoModel is a UML-based editor that works with OWL ontologies. The usage of the UML extension mechanism makes it possible to develope and maintain OWL ontologies with MDA technologies. Implemented as NeOn Toolkit (http://www.neon-toolkit.org) plugin.