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Semtinel is an application framework for the semi-automatic creation, maintenance and analysis of hierarchical concept schemes (thesaurus, classification or ontology). Semtinel supports the development of new analysis methods and visualization techniques
MouseGestureComposer is a graphical partition editor for visual artists and musicians. Basic elements are mouse movements, placed on a timeline segmented in measures, similar to classical music. Uses processing.org. Developed by numediart.org. A video tutorial is available here: http://vimeo.com/33442844
Main developper: François Zajéga - http://www.frankiezafe.org
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On The Mark is a video and image scoring system that allows one to mark any number of events and durations through a simple, easy-to-use graphical interface.
Implementation of the Weight Spherical Centroidal Voronoi Tessellation described in http://arxiv.org/abs/0912.3974
It uses this implementation of convex hull: http://www.cs.ubc.ca/~lloyd/java/quickhull3d.html
Solvere4D is a powerful, open-source, freely available post-processor that makes it easy for anyone to generate 3D animations of 3D rigid body kinematics and kinetics, with many visualization options.
A plugin for the VANTED system, called Glyph-based Link Exploration of Pathways (GLIEP). It helps to guide the navigation and exploration process of interconnected pathway visualization as well as insight into the overall interconnectivity.
Kabeja is a java library for parsing DXF and converting to SVG (dxf2svg). The library supports the SAX-api and can integrated into other applications (Cocoon,Batik). Tools for converting svg to jpeg, tiff, png and pdf are included .
PAICE is a rapid bioinformatics pathway visualization tool for KEGG-compatible accessions derived from Illumina Solexa next-gen and Affymetrix datasets. It colors KEGG pathways while appreciating detection-calls and duplicate gene copies.
JTreeMap is a Swing Component which represents a tree structure with rectangles (a TreeMap. See http://www.cs.umd.edu/hcil/treemap/). KTreeMap is the SWT component for treemapping (see http://en.wikipedia.org/wiki/Treemapping). It is an Eclipse plugin.
MedioVis is concerned with the user-centred development of next generation visual information seeking systems for novice and nonexpert users. Various Browsing-oriented data exploration strategies are supported (overview & detail, filtering, zooming etc.)
Intrepid Bioinformatic's Integrative Genomics Viewer (IGV) modifications for viewing NGS files on IGV with data located on remote servers, accessed by web services.
JEuclid is a complete MathML rendering solution, consisting of: a MathViewer application, command line converters from MathML to other formats, an ant task for autmated conversion, display components for AWT and Swing and a component for Apache Cocoon
Worldlines visualizes special relativity, as particles near lightspeed trace paths in a 3D slice of 4D Minkowski spacetime. Scenes illustrate time dilation, the twin paradox, length contraction, and Bell's spaceship paradox.
Jep is a Java package for parsing and evaluating mathematical expressions. It currently supports user defined variables, constants, and functions. The open-source Jep project was halted in favor of commercial development of version 3.0 upwards.
VR Juggler is a virtual platform for virtual reality application development created at the Virtual Reality Applications Center at Iowa State University. Applications developed in VR Juggler can transparently move between a wide range of VR systems.