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Gabedit is a Graphical User Interface for FireFly (PC-Gamess), Gamess-US, Gaussian, Molcas, Molpro, MPQC, NWChem, OpenMopac, Orca, PSI4 and Q-Chem computational chemistry packages.
An intuitive molecular editor and visualization tool
Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science and related areas. It offers a flexible rendering framework and a powerful plugin architecture.
is a molecular viewer & model builder for quantum chemistry programs. It has an interface with NWChem, CP2K and PC GAMESS/Firefly quantum programs. http://www.biomolecular-modeling.com/Products.html
GSH builder is a free Galois Sub-Hierarchy visualization tool.
The algorithm for calculating GSH is called Pluton and the present
Java realization is based on two articles.
"Efficiently computing a linear extension of the sub-hierarchy of a
Concept Lattice" by Anne Berry, Marianne Huchard,
Ross M. McConnell, Alain Sigayret and Jeremy P. Spinrad.
"Performances of Galois Sub-hierarchy-building algorithms" by
Gabriela Arevalo, Anne Berry, Marianne Huchard,
Guillaume Perrot...
Molecular Graphics and Dynamics. Molecular model builder. Part of the Ascalaph Designer http://sourceforge.net/projects/asc-designer/ project. Windows & Linux.
equal III is an equation visualization tool. It's possible to graph f(x,y) = 0. So it is able to graph systems of equations and inequations, and do graphic change analysis.