8 projects for "cell" with 2 filters applied:

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  • 1
    ComplexHeatmap

    ComplexHeatmap

    Make Complex Heatmaps

    ComplexHeatmap is an R/Bioconductor package by Zuguang Gu et al. designed to create highly flexible, complex, richly annotated heatmaps and related visualizations. It allows arranging multiple heatmaps, adding annotations, combining heatmaps, customizing colors, layouts, and integrating other plots. Often used in genomics/bioinformatics to show expression, methylation, etc., with sidebars, annotations, clustering, etc. Highly customizable layout: combining different heatmaps, arranging and...
    Downloads: 0 This Week
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  • 2
    pyspread

    pyspread

    Python spreadsheet application

    ...The goal of pyspread is to be the most pythonic spreadsheet. Pyspread expects Python expressions in its grid cells, which makes a spreadsheet specific language obsolete. Each cell returns a Python object that can be accessed from other cells. These objects can represent anything including lists or matrices. Dependencies + Python (>=2.7, <3.0) + numpy (>=1.1.0) + wxPython (>=2.8.10.1, Unicode version required) + matplotlib (>=1.1.1) + pycairo (>=1.8.8) Optional dependencies + python-gnupg (>=0.3.0, for opening own files without approval) + xlrd (>=0.9.2, for loading Excel® files) + xlwt (>=0.9.2, for saving Excel files, pyspread >=v0.3.0 required) + jedi (>=0.8.0, for tab completion and context help in the entry line, pyspread >=v0.3.0 required) + basemap (>=1.0.7, for the weather example pys file)
    Downloads: 1 This Week
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  • 3
    A Matlab based project for tracking cell nuclei in 3D space over time from live imaging data. (Sample images and lineage data are available under "Files".)
    Downloads: 0 This Week
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  • 4

    ncmerge

    Merge multiple irregular NetCDF grids into an equirectangular grid.

    ncmerge can combine cell-based irregular grids very quickly into a single equirectangular (Plate Carree) grid to simplify visualization workflows. It first creates a map file from coordinate grids, and then performs fast lookups when regridding data values. 3D time varying variables are supported.
    Downloads: 0 This Week
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  • 5
    PaloKettlePlugin is for Pentaho Data Integration aka Kettle. It's a Cell Input und Output Step for Palo Molap. The first code was developed by mybiq/3A-Strategy, the PDI-3 version has been developed by Stratebi. Now by 3A-Strategy and Litebi for PDI
    Downloads: 1 This Week
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  • 6
    Avenzoar Digital Pathology Tool
    Avenzoar is a one-year exploration of renal cell carcinoma morphology and its related single nucleotide polymorphisms (SNPa) as a method of automating diagnosis of cancer by using a computer-aided decision tree controlled by analytical statistics.
    Downloads: 0 This Week
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  • 7
    4-Dimensional Cell Simulator (4DiCeS) is a framework on hybrid (stochastic and deterministic) modeling and simulation of (whole) cell environments in 4D. The framework may incorporate any reaction and diffusion algorithms applicable in a 4D grid layout.
    Downloads: 0 This Week
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  • 8
    Parallel implementation of watershed4d on the processor Cell
    Downloads: 0 This Week
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