Search Results for "regular expression tool"
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Showing 16 open source projects for "regular expression tool"
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PySR
High-Performance Symbolic Regression in Python and Julia
PySR is an open-source tool for Symbolic Regression: a machine learning task where the goal is to find an interpretable symbolic expression that optimizes some objective. Over a period of several years, PySR has been engineered from the ground up to be (1) as high-performance as possible, (2) as configurable as possible, and (3) easy to use. PySR is developed alongside the Julia library SymbolicRegression.jl, which forms the powerful search engine of PySR. -
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Broot
A new way to see and navigate directory trees
...Never lose track of file hierarchy while you search. Broot tries to select the most relevant file. You can still go from one match to another one using tab or arrow keys. You may also search with a regular expression. To do this, add a / before the pattern. You may also apply logical operators or combine patterns, for example searching test in all files except json ones could be !/json$/&c/test and searching carg both in file names and file contents would be carg|c/carg. -
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Ridgepole
Ridgepole is a tool to manage DB schema. It defines DB schema
Ridgepole is a database schema management tool that treats your schema as code by expressing it in a Ruby DSL and applying diffs to keep databases in sync. You describe the desired state in a “Schemafile” (tables, columns, indexes, constraints), and Ridgepole compares it with the live database to generate only the necessary changes. This diff-and-apply approach makes schema changes repeatable and reviewable, avoiding hand-written migrations for routine structural edits. It supports multiple... -
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Sloth
Mac app that shows all open files, directories, sockets, pipes, etc.
...This makes it easy to inspect which apps are using which files and sockets. View all open files, directories, IP sockets, devices, Unix domain sockets and pipes. Filter by name, access mode, volume, type, location, or using regular expressions. Sort by name, process ID, user ID, process type, bundle identifier, etc. Sloth is essentially a friendly, exploratory GUI built on top of the lsof command line tool. The output is parsed and shown in a searchable, filterable outline view with all sorts of convenient additional functionality. Sloth is free, open source software and now has a home on GitHub. ... -
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Social Network Visualizer
Social Network Analysis and Visualization software
Visit our new site: http://socnetv.org Social Network Visualizer (SocNetV) is a social network analysis and visualization application. You can draw a social network (graph/digraph) or load an existing one (GraphML, UCINET, Pajek, etc), compute cohesion, centrality, community and structural equivalence metrics and apply various layout algorithms based on actor centrality or prestige scores (i.e. Eigenvector, Betweenness) or on dynamic models (i.e. Kamada-Kawai spring-embedder) -
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AQUATONE
A tool for domain flyovers
...It doesn't really care how the piped data looks as URLs, domains, and IP addresses will be extracted with regular expression pattern matching. This means that you can pretty much give it output of any tool you use for host discovery. Aquatone is now completely focused on screenshotting and reporting. I know a lot of people used Aquatone for its DNS enumeration capabilities and it was definitely very good at that when it was released. Now other tools are doing a much better job of this, so I decided to leave it out of the new Aquatone, and instead make it easy to use it with your tool of choice. -
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miARma-Seq
a A suite designed to study mRNAs, miRNAs and circRNAs
miARma-Seq, which stands for miRNA-Seq And RNA-Seq Multiprocess Analysis, is a suite designed to study mRNAs, miRNAs and circRNAs. It is able to perform differential expression analysis, miRNA-mRNA target prediction and functional analysis among others. Most importantly, it can be applied to any sequenced organism, and it can be initiated at any step of the workflow. As a stand-alone tool, is both easy to install and extremely flexible in terms of its use. It brings together well-established software in a single bundle, allowing a complete analysis from raw data. ... -
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CorNetMap
A tool for Gene Expression Correlation Network
Capabilities of CorNetMap: 1. Read data as tab-delimited text file. Can be used for analysis of any data set beyond gene expression. 2. Capable of both two-dimensional and multidimensional data analysis. 3. Calculate Pearson correlation and cross-correlation for analysis data with phase difference. 4. Generate correlation Heat-map and draws network map. 5. Save correlation data as text file. How to use and doccumentation:... -
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A Tool for Retrieval, Visualization and Analysis of biological Pathways. Import a Gene or Protein Set from any Excel file. Automatically find signaling Pathways from KEGG. Integrate your Data in Seconds with a live interactive Force-directed Layout.
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EyePro v3.0 (ergo)
Award winning eye health monitoring and Work Stress reliever
What is EyePro? EyePro is a handy PC application that regularly reminds you to take “Short Breaks for your Eyes” with many exciting, customizable and Innovative features. It is an innovative tool done under the guidance of eminent Eye Doctors Who is Eye Pro for? Everyone who spends more than a 2 hours per day looking at a display. But especially People who spend ot of time in-front of PC, Employees with Computer related job environment, Students, Computer Professionals, will... -
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...webStraktor features a scripting language to facilitate the collection, the extraction and the storage of information available on the web, including images. The scripting language uses elements of the Regular Expression and xPath syntax. The webStraktor scripting language has a small instruction set and its syntax is easy to master. The standard webStraktor output format is XML based, either in ASCII, UTF-8 or ISO-8859-1 (Latin1) code pages. webStraktor relies on the Apache HttpClient for retrieving content via the HTTP protocol. ...
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AntiSensePolyAFinder
A antisense polyA search tool for SAPAS data analysis
To find more details about the correlation level between sense and antisense transcripts to depend on gene expression levels, we used our SAPAS data to develop a method to analyze antisense polyA. -
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Ginkgo is a spotted microarray data pre-processing platform featuring analysis functionalities for CGH and expression data. [Pathogen Functional Genomics Resource Center (PFGRC) @ J. Craig Venter Institute (JCVI)]
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A tool for visualizing regular polytopes in stereographic projection. Capabilities include: a large database of Coxeter polytopes, 6-axis motion control, animation, fly-though, stereo viewing, high-res capture, depth-blur, and many style options.
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Microarray data analysis tool for detection of chromosomal abberations, statistical evalutation of evidence and visualization of expression levels.
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BIRBU (BIological Relationship BUilder) is a Java tool for microarray gene expression data analysis. BIRBU identifies biologically significant relationship between genes using microarray data and prior knowledge on relationships between genes.
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