Showing 3 open source projects for "parallel search"

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    HiPlot

    HiPlot

    HiPlot makes understanding high dimensional data easy

    HiPlot is an interactive visualization toolkit for exploring high-dimensional experiments, especially those produced during hyperparameter search or ablation studies. Its core view is a parallel-coordinates plot that lets you brush, filter, and highlight runs to spot trade-offs, correlations, and Pareto fronts at a glance. You can load results from simple CSV/JSON logs or programmatically push “experiments” with typed fields, metrics, and tags. The UI supports dynamic filtering, color mapping, and tooltip details so you can iteratively narrow to the most promising configurations. ...
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  • 2

    Ship Lock Scheduling

    Scheduling lockages at ship locks with several parallel lock chambers

    This Java software includes algorithms of combinatorical optimization for the NP-hard offline ship lock scheduling problem. Solutions and performed computations can be displayed graphically. Besides, there is a framework for generating test instances and running these in parallel, as well as R/JGR code for statistical evaluation. Some tools for estimating the quality of calculated solutions will be further improved. Initially the software was developed within a project of TU Berlin regarding...
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  • 3

    PRADA

    PRADA : Pipeline for RNA-Sequencing Data Analysis

    ...PRADA currently supports 7 modules to process and identify abnormalities from RNAseq data: preprocess: Generates aligned and recalibrated BAM files. expression: Generates gene expression (RPKM) and quality metrics. fusion: Identifies candidate gene fusions. guess-ft: Supervised search for fusion transcripts. guess-if: Supervised search for intragenic fusions. homology: Calculates homology between given two genes. frame: Predicts functional consequence of fusion transcript
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