Showing 1247 open source projects for "mchange-commons-java"

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  • 1
    apache spark data pipeline osDQ

    apache spark data pipeline osDQ

    osDQ dedicated to create apache spark based data pipeline using JSON

    This is an offshoot project of open source data quality (osDQ) project https://sourceforge.net/projects/dataquality/ This sub project will create apache spark based data pipeline where JSON based metadata (file) will be used to run data processing , data pipeline , data quality and data preparation and data modeling features for big data. This uses java API of apache spark. It can run in local mode also. Get json example at https://github.com/arrahtech/osdq-spark How to run Unzip the zip file Windows : java -cp .\lib\*;osdq-spark-0.0.1.jar org.arrah.framework.spark.run.TransformRunner -c .\example\samplerun.json Mac UNIX java -cp ./lib/*:./osdq-spark-0.0.1.jar org.arrah.framework.spark.run.TransformRunner -c ....
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  • 2

    HSRA

    Hadoop spliced read aligner for RNA-seq data

    HSRA is a MapReduce-based parallel tool for mapping reads from RNA sequencing (RNA-seq) experiments. RNA-seq analyses typically begin by mapping reads to a reference genome in order to determine the location from which the reads were originated, which is a very time-consuming step. This tool allows bioinformatics researchers to efficiently distribute their mapping tasks over the nodes of a cluster by combining a fast multithreaded spliced aligner (HISAT2) with Apache Hadoop, which is a...
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  • 3

    OGLDataScienceTool

    Opengl tool for data science visualization

    Data visualization tool written in LWJGL Compatible with libgdx and other opengl wrappers The project depends on apache poi, and apache commons, for office files support Planned features for next release: * reading json, and other nosql data structures * jdbc connection for creating dataframes * data heatmaps, and additional plots for questions, contact me kumar.santhi1982@hotmail.com more details: http://www.java-gaming.org/topics/ds/41920/view.html http://datascienceforindia.com/
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  • 4
    GMOL

    GMOL

    A tool for 3D genome structure visualization

    GMOL is an application designed to visualize genome structure in 3D. It allows users to view the genome structure at multiple scales, including: global, chromosome, loci, fiber, nucleosome, and nucleotide. This software was built upon the pre-existing Jmol package by Prof. Cheng's group. The software is developed in Prof. Jianlin Cheng's Bioinformatics, Data Mining and Machine Learning Laboratory in the Computer Science Department at the University of Missouri - Columbia, USA. The project...
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  • 5
    JBotSim is a multipurpose dynamic network simulator that allows to quickly prototype a distributed algorithm and test its behavior on a set of static or mobile nodes. If mobile, the nodes can be controlled by the mouse or by program.
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  • 6
    Effectopedia
    Effectopedia is open knowledge aggregation and collaboration tool that provides a means of describing adverse outcome pathways in encyclopedic manner.
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  • 7
    Alfresco Audit Analysis and Reporting
    With Alfresco Audit Analysis and Reporting (A.A.A.R.) is provided a solution to extract, store and query audit data together with the document/folder informations at a very detailed level, with the goal to be useful to the end-user in a very easy way. To reach that goal, to make the data more friendly for the end-user, the data are published in reports in well-known formats (pdf, Microsoft Excel, csv, etc.) and stored directly in Alfresco as static documents organized in folders, versioned,...
    Downloads: 2 This Week
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  • 8

    Fudaa

    https://gitlab.com/fudaa

    Official site: https://fudaa-project.atlassian.net/wiki/spaces/FUDAA/overview Sources moved to GitLab: https://gitlab.com/fudaa
    Downloads: 1 This Week
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  • 9
    Active Intelligence Server

    Active Intelligence Server

    Reporting, Dashboarding, Analytic, Self-service BI, Ad-hoc reporting

    Active Intelligence Server 2 (AIS) is a data visualization tool and fully featured reporting server which enable users from open source community to host any reports created using BIRT, Jasper and Pentaho community edition allowing organization to leverage open source technologies and enable them to use AIS as a reporting server to deploy their existing and new reports seamlessly onto AIS for secure sharing the information in different file formats and schedule to make system automation and...
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  • 10
    RadiationHelper

    RadiationHelper

    Alpha, Beta, Gamma measurements and Nuclide exposure

    RadiationHelper is a data analysis tool for : 1. gross alpha and beta radiation measurement and detector calibration using experimental data (counts acquired by alpha-beta devices). 2. gamma spectroscopy measurements and detector calibration using experimental data (spectra acquired by acquisition software such as Assayer, Gamma Vision, Maestro) 3. gross alpha,beta, gamma detector efficiencies and gamma peak efficiency can be theoretical computed using Monte-Carlo simulation technique for radiation transport (based on EGSnrc toolkit) 4.dose assessment in human body exposed to radiations from nuclides in several common scenarios such as air exposure, water submersion, ground surface, internal ingestion or inhalation. 5. quick dosimetry and shielding computations. It is platform independent (written entirely in Java). Source code included in jar files! Also, available on GitHub: https://github.com/ZiliasTheSaint/RadiationHelper.git Checkout for dependent modules!
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  • 11
    Plots a parameterized family of curves
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  • 12

    ProMoVis

    A Tool for Control Structure Selection in Interconnected Processes

    ProMoVis is a software environment which can visualize a process system and analyze this interconnected system using the control structure selection methods. The tool s implemented as either a standalone software for industrial use or as a research version which can run within Matlab, both released under the Apache Open Source license. ProMoVis is not limited to the control structure selection problem as additional analysis methods can be added easily. For the re-use of existing models a...
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  • 13
    ChunJun

    ChunJun

    A data integration framework

    ChunJun is a distributed integration framework, and currently is based on Apache Flink. It was initially known as FlinkX and renamed ChunJun on February 22, 2022. It can realize data synchronization and calculation between various heterogeneous data sources. ChunJun has been deployed and running stably in thousands of companies so far. Based on the real-time computing engine--Flink, and supports JSON template and SQL script configuration tasks. The SQL script is compatible with Flink SQL...
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  • 14
    As of 2018-06-28, this project has moved to https://github.com/AdamaJava. This copy of the code will remain but all new code updates and releases will be from the new site. Java code developed by the Australian ICGC team for operating on next-generation sequencing data. This code is currently being maintained and expanded by the QIMR Berghofer Genome Informatics team (http://www.qimrberghofer.edu.au/lab/genome-informatics/) More details and documentation can be found on the wiki: http://sourceforge.net/p/adamajava/wiki/Home/
    Downloads: 2 This Week
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  • 15
    DSTK - Data Science TooKit 3

    DSTK - Data Science TooKit 3

    Data and Text Mining Software for Everyone

    DSTK - Data Science Toolkit 3 is a set of data and text mining softwares, following the CRISP DM model. DSTK offers data understanding using statistical and text analysis, data preparation using normalization and text processing, modeling and evaluation for machine learning and algorithms. It is based on the old version DSTK at https://sourceforge.net/projects/dstk2/ DSTK Engine is like R. DSTK ScriptWriter offers GUI to write DSTK script. DSTK Studio offers SPSS Statistics like GUI...
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  • 16

    miARma-Seq

    a A suite designed to study mRNAs, miRNAs and circRNAs

    miARma-Seq, which stands for miRNA-Seq And RNA-Seq Multiprocess Analysis, is a suite designed to study mRNAs, miRNAs and circRNAs. It is able to perform differential expression analysis, miRNA-mRNA target prediction and functional analysis among others. Most importantly, it can be applied to any sequenced organism, and it can be initiated at any step of the workflow. As a stand-alone tool, is both easy to install and extremely flexible in terms of its use. It brings together...
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  • 17
    Penthode

    Penthode

    Penthode simulates, draw and plot electrical power distributions

    Given a simple net-list describing the high level power architecture of your system Penthode: - simulates the voltage and current from device turn on to the steady state. - highlights components working out of specification - draws a nice power tree diagram showing the currents/powers balance - plots node transient voltage and gate current waveforms It is possible to change component parameters interactively to improve the design
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  • 18

    pdi-jira

    JIRA plugin for Pentaho Data Integration

    Using this PDI plugin you can connect any JIRA service even using SSL connection and perform JSON data extraction over the results. JQL is used to obtain data from the JIRA remote service.
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  • 19
    A shell for using the methods of Contextual Logic to do qualitative data analysis, mathematical research on the theory underlying Conceptual Knowledge Processing, or learning Formal Concept Analysis. It uses the framework provided by the Tockit project..
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  • 20
    JPIV

    JPIV

    Particle Image Velocimetry

    JPIV is a platform independent, graphical stand-alone application for Particle Image Velocimetry (PIV) written in Java. PIV is an optical technique for measuring fluid flow velocities. JPIV moved to GitHub. Please visit us at: https://eguvep.github.io/jpiv/
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  • 21

    RRO

    Risk Reduction Overview

    The Risk Reduction Overview (RRO) method presents a comprehensible overview of the coherence of risks, measures and residual risks. The method is designed to support communication between different stakeholders in complex risk management. Despite the widely accepted need for risk management we believe this is the first practical method that delivers a comprehensive overview that improves communication between different stakeholders.
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  • 22
    Ycad is a library of CAD functions in Java. Currently only DXF is supported for reading, viewing and writing. The DXF drawing may be rendered to a Graphics object for printing or imaging.
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  • 23
    CamShaft
    Calculation of camshafts - allows to define a camshaft profile on the set trajectory which should provide the given mechanism. The trajectory can be set graphically, co-ordinates or function.
    Downloads: 4 This Week
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  • 24
    This site hosts the source code for C++ version of the Broker for SBW, NOM module, advanced simulation suite, analysis applications and model editors.
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  • 25
    Dataflow Java SDK

    Dataflow Java SDK

    Google Cloud Dataflow provides a simple, powerful model

    The Dataflow Java SDK is the open-source Java library that powers Apache Beam pipelines for Google Cloud Dataflow, a serverless and scalable platform for processing large datasets in both batch and stream modes. This SDK allows developers to write Beam-based pipelines in Java and execute them on Dataflow, taking advantage of features like autoscaling, dynamic work rebalancing, and fault-tolerant distributed processing.
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