Search Results for "sql command line" - Page 5
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Showing 313 open source projects for "sql command line"
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Mauve computes and interactively visualizes genome sequence comparisons. Using FastA or GenBank sequence data, Mauve constructs multiple genome alignments that identify large-scale rearrangement, gene gain, gene loss, indels, and nucleotide substutit
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Corbata
CORe microBiome Analysis Tools
Corbata is a set of statistical tools that can be used to analyze the core microbiome across a set of samples. -
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TO DOWNLOAD ANTIPRISM GO TO: http://www.antiprism.com/download Antiprism is a set of programs for generating, manipulating, transforming and visualising polyhedra.
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Creates interactive plots of data lines over a time scale. Automatic detection of input format and scale will result in instantaneous results without any need for configuration.
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Informatica DBMetadata
Java utility that reads the metadata from table(s)
Dbmetadata is a Java utility that reads the metadata from table(s) in a specified database and creates the Informatica XML to import into the repository. I created this utility when we were migrating to a new platform and needed a quick way to create flatfile and relational sources and targets that matched the DDL of the table. I also needed to use shortcuts. If you use the import table list, it will create one XML file with all of the tables and shortcuts (if a shortcut folder is specified)... -
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Explore InSAR data and more
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Lossless compressor for multichannel 8,16 and 24 bits audio data, with the ability of password data protection. Being 'lossless' means that no data/quality is lost in the compression - when uncompressed, the data will be identical to the original.
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Perl OBD-II Logger
A Perl program for logging OBD-II PID data
The goal of the Perl OBD-II Logger project is to create a flexible and efficient application that can capture and log OBD-II Mode 0x01 PID data from an automotive scantool. It is designed with accurate and efficient PID data logging in mind, and provides NO support for reading or resetting diagnostic trouble codes. By default, the output log file contains time-stamped PID values in a simple Comma Separated Values (CSV) format that can be readily imported into popular data analysis or... -
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The data pumper is the database tool! ... a Java command line program to copy data from a database or text file into a database / text file (with optional mailing). Make a select on Database-A and a update on Database-B, or execute a SQL statement. For IBM i (AS400) users is also a CL-Command included.
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HBS-tools
a set of tools for hairpin bisulfite-seq data analysis
The emerging genome-wide hairpin bisulfite sequencing technique facilitates the determination of DNA methylation fidelity and accurate methylation calling. Here we present HBS analyzer, the first command line based open-source tool to process genome-wide hairpin bisulfite sequencing data. It accepts Illumina paired-end sequencing reads as input, performs alignment to recover the original (pre-bisulfite-converted) DNA sequences and calls methylation status for cytosines on both DNA strands. -
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Sample Tracking
Rediscover the Simplicity http://www.atgclabs.com/
Help us to improve Freezer Web Access. We want to hear your feedback! Request new Freezer Web Access feature or module and receive a free Single User version with new feature. https://www.atgclabs.com/products/fw Freezer Web Access is a user friendly program designed to assist researchers with establishing an efficient system for storing frozen biological samples. FWA can track all of your research, development and process scale-up data in a single data storage platform, providing a... -
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Informatica Create ctl
automate Informatica control file creation
Createinfactl is a Java utility that enables Administrators to fully automate Informatica deployments from the command line by creating thedeployment group control XML file to be used with the pmrep command “deploydeploymentgroup”. Default settings for the control file can be overridden at the command line and works with both static and dynamic deployment groups in the repository. Please review the “Using the Deployment Control File” section in the Informatica Command Reference guide for further help on the deployment control file. ... -
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ipcvis
Visualize Inter Process Communication
Small python script that can visualize Inter Process Communication on Linux. It can create a graph of TCP and Unix sockets, pipes and also process hierarchy. Short (59 sec) demo visualizing ssh client connecting to ssh server on the same Ubuntu host: http://youtu.be/8XFKwzkexQY Longer (2 min 13 sec) demo visualizing ZoneMinder surveillance solution operation (stopping, starting, enabling and viewing camera): http://youtu.be/kM7klE61Ibk Tested on Ubuntu 14.10 and Debian... -
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Informatica ExecuteWorkflow
A utility that uses Informatica Operations API
A Java utility that uses the Informatica Operations API allowing parameter inputs, trapping of suspended workflows and ability to send an email on failure. This utility extends the functionality of the pmcmd startworkflow and starttask command. If you pass in a parameter file and individual parameters on the command line, a temporary parameter file is created that has the values from the parameter file and appends the individual parameters. The e-mail sent is in HTML format using tables and looks similar to the workflow monitor output. -
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A More Accurate Fourier Transform
Computes Accurate Fourier Transform via Explicit Integration not FFT
...It has been shown recently that EI methods can be more accurate than FFT methods (Courtney and Courtney, A More Accurate Fourier Transform) for scientific data analysis and that EI methods can be implemented in reasonable times with modern computing power. This project makes the source code (and command line Windows executable) developed in that study openly available for scientific and engineering uses. -
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This is a sophisticated & integrated simulation and analysis environment for dynamical systems models of physical systems (ODEs, DAEs, maps, and hybrid systems). It supports symbolic math, optimization, continuation, data analysis, biological apps...
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Pyxplot
Graph Plotting Package and Scientific Scripting Language
Pyxplot is a scientific scripting language, graph plotting tool and vector graphics suite. It runs in a command-line environment under Linux, Mac OS X, and other POSIX systems. -
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...ADOMA is a commandline program that can easily be used in pipelines. For more information check the README.md in the Files section. How to cite ADOMA: Zaal, D. and Nota, B. (2016), ADOMA: A Command Line Tool to Modify ClustalW Multiple Alignment Output. Mol. Inf., 35: 42–44. doi: 10.1002/minf.201500083 http://onlinelibrary.wiley.com/doi/10.1002/minf.201500083/abstract
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JBerd
Java tools for decoding and manipulating BER encoded ASN.1 Files
A simple Java ASN BER decoder and profiler A tool for easy manipulation of BER encoded files. An "awk" for ASN.1 BER (for Unix people) or maybe a "notepad" for ASN.1 BER (for Windows people). Jberd (Java BER decoder) is a lightweight BER decoder and associated tools for interpreting and processing BER encoded ASN.1 files. The following facilities are provided: • JBerd Profiler. A tool for profiling the contents of BER encoded files • JBerd Flattener. A tool for converting BER... -
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scipion-xmipp
Image processing framework to integrate EM software packages.
...Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated into Scipion and contains the algorithms in the core libraries and command line programs. -
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CSV*Extractor Pro (Windows command line)
Spool you scalar data in CSV format from 14 major Databases.
Command line tool for data export from major relational data stores (RDBMS). DB2 Advanced Enterprise Server DB2 Advanced Workgroup Server DB2 Developer Edition DB2 Enterprise Server DB2 Express DB2 Express C DB2 Workgroup Server Exadata Infobright Informix IDS Informix Innovator C MariaDB MySQL Oracle Oracle XE PostgreSQL SAP Sybase ASE SQL Lite SQL Server Enterprise SQL Server Express Sybase IQ Sybase SQL Anywhere TimesTen -
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CSV*Loader PRO (Windows command line)
Loads CSV file to14 databases
Windows command line tool for CSV data load to 14 relational stores. -
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CSV*Extractor for RDBMS (command line)
Extract table data is CSV format from 14 databases.
Spools data for a given query or table from 14 databases. Windows command-line application.
