Search Results for "java modelling tools" - Page 4

A collection of tools for working with the comparative data analysis ontology including import/export facilities for common phylogenetic file formats, and also a triple-store framework.

A Java library and set of tools to quickly and easily manipulate graphs (set of nodes and edges) and dynamic graphs. The principal trait of this library is its ability to manage (create, edit, layout, display) continuously evolving graphs. The development of this project now takes place on Github. Visit the official Graphstream website at http://graphstream-project.org

VoltIJ (for VOLume viewing Tools for ImageJ) is a plugin for ImageJ allowing the 3D visualization of volumetric scalar data.

Cyberinfrastructure Shell (CIShell) is an open source, community-driven framework/application for the integration and utilization of datasets, algorithms, tools, and computing resources. Algorithms can be integrated using most programming languages.

The SPASE Toolkit contains a set of command-line applications which can be used to generate, validate, referentially check, use and organize resource descriptions written in SPASE XML.

primeHandle is a set of data management tools in support of the PrIMe Initiative (http://primekinetics.org). primeHandle includes graphical user interfaces for searching through data collections, editing and submitting data to the PrIMe Data Depository.

SPASE Model is a collection of tools for working with the structured data model information. Tools can convert the relational version of the data model into various expressions, including XSD, XMI and PDF documentation.

The SPASE Web Server is a Jetty based application server that is pre-configured to demonstrate SPASE services and tools. With the web server you can explore a variety of SPASE technologies.

Sanchay is a collection of tools and APIs for language researchers. It has some implementations of NLP algorithms, some flexible APIs, several user friendly annotation interfaces and Sanchay Query Language for language resources.

...Chipster’s ability to provide a biologist-friendly access to a powerful analysis platform is technically based on a desktop application user interface, a flexible distributed architecture, and the ability to integrate many types of analysis tools (command line, R/Bioconductor, Java, Web Services etc). The platform is generic and easily extendable to other areas, even beyond bioinformatics. For more information, please see http://chipster.csc.fi and http://genomebiology.com/1471-2164/12/

Jipes provides open source Java APIs deeply integrated into the Oracle RDBMS, including an Ant task for building and exporting database objects. A Java Data Cartridge replacing database links is also in process.

Jasper Open Servlet is a Java HTTP servlet that provides complex, drillable reports created with Jasper/iReports. It can be encapsulated into a portlal using an iframe portlet to add reporting capabilities to all your web applications - Files released.

powerPlant is a plant modelling tool based on parametric plant descriptions, producing highly detailed models that can be exported to 3ds. Deriving similar plants is a matter of 1 click! Complete scenes can be composited with the integrated scene editor.

Patacritism is a project to develop interpretive tools for online humanities.

This project provides a library of easy to use 2D graphics editor tools and a functional and extendable stand-alone graphics editor.

Nevada is a tool for interactive visualization of dynamic networks. Unlike other dynamic network visualization tools it's focussing on visualizations preserving the user's mental-map. Import of Pajek files is supported.

Software tools for building interactive information visualization applications. Prefuse supports a rich set of features for data modeling, visualization, animation, and interaction for both Java (prefuse) and Flash (prefuse flare).

JRubik is a set of tools for navigating and reporting over OLAP Datasources, mainly Mondrian and XMLA servers. This project is based on the components developed by the JPivot project.

The Databionics ESOM Tools offer many data mining tasks using Emergent Self-Organizing Maps. Visualization, clustering, and classification of high-dimensional data using databionics principles can be performed interactively or automatically.

Entrance is the MySQL browser with charts and tools for data exploration. Requires JRE 1.5. Visit our new web site, http://dbentrance.com/, for more details.

Use Pentaho open source business intelligence tools and MySQL to collect & distribute web analytics (clickstream) data. Extract data from logs, load database tables, & present the information in dashboards, analysis cubes, and reports for business users. This project has been moved to github - https://github.com/cjlavigne/breadboard

Tools for finite automata simulation, minimization and grammar utilities (left recursion removal, context free grammar simplification and transformation to Chomsky Normal Form).

This project aims to develop a cross platform environment for utilisation of various open source and freely available molecular dynamics and bioinformatics tools. Some extra features are included such as protein hydrophobicity and hydrophilicity plots.

The complexity project will be a home for various tools and libraries associated with modelling complex systems. Initially featured will be the Central Dogma set of gene regulatory network simulation libraries, which have been recently open sourced.

Open2Dprot is an open-source proteomics project for the development of bioinformatic tools for n-dimensional protein expression data analysis of quantified protein expression across multiple samples from research experiments.