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MongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
CHIVE provides an extensible framework on top of which software visualisation tool researchers can quickly develop tools that take advantage of the 3-Dimensional graph representations inbuilt in the framework or extend them to suit their own requirements
phpByteBazar is a web based, operating system independent file management and exchange application with multiple user support and comprehensive indexing and searching capabilities.
Webcockpit is a Web Application Generator for realtime charting and monitoring solutions. Generates JSP code to create chart images and HTML tables from SQL queries. Supports Drill-Down and pluggable look&feel. Uses JFreeChart, Displaytag and Cewolf.
A utility for animating molecular vibrations. Normal modes are read from a file automatically determined to be from Aces2, Gamess, PC Gamess, Gaussian 90/92/95/94/98, ADF, Dalton, Jaguar, MOPAC, or Spartan.
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vinex (virtual network explorer) reduces the complexity of social networks by visualizing their structures. Based on data collected by a webcrawler from virtual communities, vinex offers the possibility to explore relationships between community members.
CompuCell3D is a software framework for multimodel simulations of biocomplexity
problems. It has been developed as an ongoing project for the Interdisciplinary Center
for the Study of Biocomplexity at the university of Notre Dame.
Microarray Data Analysis System, a Java application, provides an intuitive graphical scripting interface to design analysis protocols and perform normalization and filtering to microarray data by a variety of implemented statistical analysis modules.
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The BioDataServer is a database integration system. It implements a mediator-wrapper architecture and offers a SQL interface. The data integration is based on user defined intergrated schema and adapter that wrap any kind of data source.
AlphaMiner is an open source data mining platform that offers versatile data mining model building and data cleansing features with an user friendly workflow interface.
Uberviewer is a java/swt log processor for Uberlogger (a kernel-based observatory). It allows real-time analysis of a remote OS, including process and I/O monitoring.
This tool is intended to be helpful for security researchers and malware analysts.
The JChemPaint Applet and Swing Application are Java programs for drawing 2D chemical structures like those found in most chemistry textbooks. It is based on the Chemistry Development Kit (cdk.sf.net). Downloads, tracker, and source code repository can be found on https://jchempaint.github.io
Centre is a synthetic trajectory generator environment that aim to generate semantic-based trajectory datasets usable for spatio-temporal data-mining algorithms in testing and validation process.
Graph Theorizer will be a java application that will help to teach and research Graph Theory. We will support Windows, Linux, and Mac in our first releases, while hopefully moving towards any platform that supports Java Standard Editon.
Bootchart is a tool for performance analysis and visualization of the GNU/Linux boot process. Resource utilization data and process information are collected during the boot process and can later be displayed in a PNG, SVG or EPS chart.
Digital graph 1.3 is an advanced JAVA SWING component for modelling, displaying, saving and loading graphs(using XML and XMLSchema). It is fully documented and requires jdk 1.5.x.Version 1.3 adds 9 bug fixs, 3 rengineering and 4 new features.
JavaCET is an API wrote in Java that allows to analyze Java source code and libraries, and control its execution and its trace in an integrated and comprehensible object-oriented way. It allows backwards execution.
The Information Visualization Cyberinfrastructure is a graphical tool with diverse modeling, analysis, and visualization algorithms for education and research. This tool is built on CiShell: Cyberinfrastructure Shell.
MirkE is a platform-independent Java application using Hibernate, HSQLDB and Colt designed to facilitate common but tedious calculations on spectrophotometric and colormetric data for molecular and cellular biology assays.
CSF-Crowd Simulation Framework A Massive Crowd Simulation is a computer simulation of a crowd of agents. Agents are digital characters with a certain artificial intelligence. The individual agents can act on their own, they don't need to be pre-prog
Diagram (JGraph) driven simulator. Bondgraphs > nonlinear differantial system > plot: implemented for economics and ecology. Network analysis: emergy propagation implemented. Would also fit for electronics, mechanics, cost, GWP, footprint analysis.