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MANTI is a one-stop shop N-termini annotation & evaluation solution. MANTI was previously (un)known as muda.pl ahead of v3.7, the project was renamed to MANTI.pl with v3.7 on 2019-06-24.
It congregates information from different MaxQuant or DiaNN/MSFragger output files into a master file suitable explicitly for protein neo-termini analyses. The central anchor for the data congregation is the modificationSpecificPeptides.txt or diann-output.pr_matrix.tsv file - additional data is inferred...
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muda.pl was renamed to MANTI.pl with v3.7, project development can be tracked on the MANTI project page on sourceforge.net. Old versions remain here for archival purposes.
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muda.pl is an evaluation script (written in Perl) without great dependencies.
It congregates information from 4 different MaxQuant output files into a master file suitable explicitly for protein neo-termini analyses. The central anchor for the data...
This project helps to digitize field data for a certain Bird Census method.
Namely, bird census based on personal inspection or small (~10 km^2) regions with recording birds' position and behaviour on paper.
This project makes it easy to annotate such field data and to make this data available for statistical analysis.
We developed a RNA-Seq Data Annotation Pipeline named RNADAP, which measure genes expression in isoform level, work with high speed and less memory usage. Besides, our pipeline can be compatible with results from different mapping software.
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