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    nichenetr

    nichenetr

    NicheNet: predict active ligand-target links between interacting cells

    ...This allows to predict ligand-receptor interactions that might drive gene expression changes in cells of interest. This model of prior information on potential ligand-target links can then be used to infer active ligand-target links between interacting cells. NicheNet prioritizes ligands according to their activity (i.e., how well they predict observed changes in gene expression in the receiver cell) and looks for affected targets with high potential to be regulated by these prioritized ligands.
    Downloads: 1 This Week
    Last Update:
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  • 2
    N-Browse is a client-server package for interactive visualization of network data with heterogeneous types of links, intended for ease of use and designed using a generic database schema for data integration and visualization.
    Downloads: 0 This Week
    Last Update:
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