Search Results for "seismic data processing software"
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Showing 25 open source projects for "seismic data processing software"
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Kapacitor
Open source framework for processing, monitoring, and alerting
Open source framework for processing, monitoring, and alerting on time series data. Kapacitor is a real-time data processing engine for monitoring and alerting, specifically designed to work with time-series data from InfluxDB. -
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SageMaker Spark Container
Docker image used to run data processing workloads
Apache Spark™ is a unified analytics engine for large-scale data processing. It provides high-level APIs in Scala, Java, Python, and R, and an optimized engine that supports general computation graphs for data analysis. It also supports a rich set of higher-level tools including Spark SQL for SQL and DataFrames, MLlib for machine learning, GraphX for graph processing, and Structured Streaming for stream processing. The SageMaker Spark Container is a Docker image used to run batch data... -
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.NET for Apache Spark
A free, open-source, and cross-platform big data analytics framework
.NET for Apache Spark provides high-performance APIs for using Apache Spark from C# and F#. With these .NET APIs, you can access the most popular Dataframe and SparkSQL aspects of Apache Spark, for working with structured data, and Spark Structured Streaming, for working with streaming data. .NET for Apache Spark is compliant with .NET Standard - a formal specification of .NET APIs that are common across .NET implementations. This means you can use .NET for Apache Spark anywhere you write... -
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Apache InLong
Apache InLong - a one-stop integration framework for massive data
Apache InLong is a one-stop integration framework for massive data that provides automatic, secure and reliable data transmission capabilities. InLong supports both batch and stream data processing at the same time, which offers great power to build data analysis, modeling and other real-time applications based on streaming data. InLong (应龙) is a divine beast in Chinese mythology who guides the river into the sea, and it is regarded as a metaphor of the InLong system for reporting data... -
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elder-pt
data flow framework
Elder-PT is a software framework, that facilitates the task of event-by-event data analysis. The basic concept is that the process of data analysis can be mapped onto a graph where data processing happens in the nodes and data flows along edges between nodes. The framework provides: 1) a parser for analysis graph configuration files 2) an API to write processing nodes that can be inserted as nodes into the analysis graph 3) a library of frequently used processing nodes The framework can coupled to data analysis software like Go4 for data visualization. -
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DocWire SDK
Award-winning modern data processing SDK in C++20
DocWire SDK, a standout C++20AI driven data processing tool, has received award from SourceForge and strong backing from Microsoft. It handles nearly 100 file types, empowering efficient text extraction, web data extraction, and document analysis. For businesses, the shift to DocWire SDK signifies a leap forward. It promises comprehensive document format support and the ability to extract valuable insights from email boxes, databases, and websites using cutting-edge AI. DocWire SDK aims to... -
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PANDA
A comprehensive and flexible quantification tool for proteomics data
PANDA is a comprehensive and flexib tool for quantitative proteomics data analysis, which is developed based on our solid foundations in quantitative proteomics for years. Several novelties have been implemented in it. First, we implement the advantage algorithms of LFQuant (Proteomics 2012, 12, (23-24), 3475-84) and SILVER (Bioinformatics 2014, 30, (4), 586-7) into PANDA. Second, we consider the state-of-art concept of quantification reliability in this quantitative workflow. On the levels... -
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Wooey
A Django app that creates automatic web UIs for Python scripts
Wooey is a simple web interface to run command line Python scripts. Think of it as an easy way to get your scripts up on the web for routine data analysis, file processing, or anything else. The project was inspired by how simply and powerfully sandman could expose users to a database and by how Gooey turns ArgumentParser-based command-line scripts into WxWidgets GUIs. Originally two separate projects (Django-based djangui by Chris Mitchell and Flask-based Wooey by Martin Fitzpatrick) it has... -
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MS-Helios
MS-Helios: A Circos wrapper to visualize multi-omic datasets
Advances in high-resolution mass spectrometry facilitate the identification of hundreds of metabolites, thousands of proteins and their post-translational modifications. This remarkable progress poses a challenge to data analysis and visualization, requiring methods to reduce dimensionality and represent the data in a compact way. To provide a more holistic view, we recently introduced circular proteome maps (CPMs). However, the CPM construction requires prior data transformation and... -
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Novel Insight Scoring
Novel Insight Scoring is analytics software for scoring customers
Novel Insight Scoring is analytical CRM software for automatically scoring customers given example (scored) data. The user of the software can set optimization time and adjust risk level (pessimistic, neutral or optimistic scoring) and score new customers without detailed knowledge about data analysis and machine learning methods. The scoring results are stored in a CSV file for further processing and importing to databases etc. -
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TSA_CRAFT
Automatic command line tool for TSA data analysis
DSF is a high-throughput platform of TSA assay to screen various conditions that affect protein stability. To facilitate TSA data analysis, we developed an automatic tool "TSA-CRAFT". TSA-CRAFT was developed by integrating PERL script and Gnuplot. PERL scripts manage the entire workflow and data processing procedures of TSA data analysis. On the other hand, Gnuplot takes over the curve fitting and result presentation works. All analysed results are coded in an html file that can be easily... -
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MS Data Miner
MS Data Miner - A web-based proteomics software
Data processing and analysis in proteomic studies is a significant challenge and very time consuming. MS Data Miner (MDM) is a freely available web-based software to analyze, process, validate, compare, and display output files from MS software, including Mascot (Matrix Science), Mascot Distiller (Matrix Science) and ProteinPilot (AB Sciex). -
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A shell for using the methods of Contextual Logic to do qualitative data analysis, mathematical research on the theory underlying Conceptual Knowledge Processing, or learning Formal Concept Analysis. It uses the framework provided by the Tockit project..
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HCS Analyzer
High Content Screening Analyzer
HCS Analyzer is an open source software dedicated to High Content Screening data processing and analysis. -
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LithoGraphX
LithoGraphX, 3D data analysis and visualization
LithoGraphX is an open source software for scientists, by scientists. It aims at providing the plant science community with a solid, open, community developed, software for 3D data analysis and visualization. LithoGraphX is a fork of the MorphoGraphX project. -
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Canvas-2DGC
A user-extensible Freemat based 1DGC and GCxGC data analysis software.
Canvas-2DGC is a user-extensible, Freemat based 1DGC and comprehensive 2DGC (GCxGC) data visualization and processing software. GCxGC-MS data analysis is supported for Agilent GCMS data format. The first goal of this project is to provide a highly intelligent analytical tool for reducing a complex chromatographic data analysis, either 1D or 2D, to just a few simple and intuitive steps. The second goal is to provide a fast and practical way of customizing or extending functionalities by ordinary users through high-level Freemat scripting. ... -
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MS2Browser
LC-MS/MS data browser designed for siderophore analysis
MS2Browser is a tool for interactive pre-processing, analysis and visualization of LC-MS/MS data. Input is an mzXML file with centroided LC-MS/MS data. The program is written in MatLab and it was designed for the analysis of siderophores (iron transporting small molecules) in bacterial media. Some of the functionality and use of MS2Browser is described as part as an open-access book chapter: http://www.intechopen.com/books/applications-from-engineering-with-matlab-concepts/small-molecule-lc-ms-ms-fragmentation-data-analysis-and-application-to-siderophore-identification A siderophore structural database assembled for this project can be found alongside the MS2Browser software (.cfw format to be used with ChemBioFinder(TM) ). ... -
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SPRITE
Parallel SNP detection pipeline
SPRITE is an open-source software package providing a parallel implementation of the Single Nucleotide Polymorphisms (SNP) detection genomic data analysis workflow. It consists of three tools: PRUNE for read alignment, SAMPA for intermediate file processing, and PARSNIP for parallel SNP calling. -
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Open Cezeri Library
Effective Linear Algebra and Computer Vision Library with JAVA
OCL stands for Open Cezeri Library (yet another linear algebra and matrix library). This library provides rapid coding as matlab ease of use. To learn for library please try to use test examples at OpenCezeriLibrary\test\test. It is originally developed at el-cezeri laboratory of Siirt University, in order to establish generic framework of reusable components and software tools for machine vision, machine learning, AI and robotic applications. Currently, it holds following main concepts 1-... -
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PRADA
PRADA : Pipeline for RNA-Sequencing Data Analysis
Massively parallel sequencing of cDNA reverse transcribed from RNA (RNASeq) provides an accurate estimate of the quantity and composition of mRNAs. To characterize the transcriptome through the analysis of RNA-seq data, we developed PRADA. PRADA focuses on the processing and analysis of gene expression estimates, supervised and unsupervised gene fusion identification, and supervised intragenic deletion identification. PRADA currently supports 7 modules to process and identify... -
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neural network designer
a dbms for neural nets. Chatbots, DTrees, random forests, n-grams,...
This project consists out of a windows based designer application and a library (that can run on multiple platforms, including android) together with several demo applications (including an MVC3 chatbot client and an android application). It is probably best compared to a database management system, but for neural networks instead of relational data. As such, the library is optimized for handling any type of data-size by using advanced streaming and caching algorithms. With the designer,... -
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q pipeline manager
q: integrated platform for pipeline configuration and management
The q utility is a platform for creating and managing data analysis pipelines. It expands the value of your existing job scheduler - either Grid Engine or TORQUE PBS - through numerous functions that help you organize, submit, monitor, manage and share your informatics work. Data processing pipelines require high-level organization and parallelization of work to optimize resource utilization and decrease the time to results. q (from queue) allows complex job sequences to be efficiently... -
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R Hadoop for Big Data
Download Free Associated R open source script files for big data analy
Download Free Associated R open source script files for big data analysis with Hadoop and R These are R script source file from Ram Venkat from a past Meetup we did at http://www.meetup.com/R-Matlab-Users/events/85160532/ Also, there is a long video and Powerpoint presentation slide PDF with R files at: http://quantlabs.net/blog/2012/11/how-to-use-hadoop-and-r-for-big-data-parallel-processing-free-download-pdf/ Download source files from... -
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BIL++ is a set of standalone C++ packages for data processing in Bioinformatics (Graph mining, Bayesian networks, Genetic algorithm, Discretization, Gene expression data analysis, Hypothesis testing).
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Command line encryption tool for one time, daemon, or stream data processing. Data stats, check sums, conversion to/from text. Data/keys from files, pipes, standard input. In-place/diverted processing or data-analysis-only. Random, file, password keys.
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