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Showing 35 open source projects for "http"
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1
POCO
Cross-platform C++ libraries for building network applications
...Create cross-platform backends in C++ for iOS and Android applications and combine it with a native or HTML5-based user interface. Create software for IoT devices that talk to cloud backends over HTTP REST APIs. See macchina.io for an IoT platform built with POCO. -
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xrayutilities
a package with useful scripts for X-ray diffraction physicists
....); convert them to reciprocal space for arbitrary goniometer geometries and different detector systems (point, linear as well as area detectors); for further processing the data can be gridded (transformed to a regular grid). More detailed description as well as documentation can be found at webpage http://xrayutilities.sourceforge.io/. Downloads for windows can be found on http://pypi.python.org/pypi/xrayutilities Development is performed on github: https://github.com/dkriegner/xrayutilities -
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Uranie
Uranie is CEA's uncertainty analysis platform, based on ROOT
Uranie is a sensitivity and uncertainty analysis plateform based on the ROOT framework (http://root.cern.ch) . It is developed at CEA, the French Atomic Energy Commission (http://www.cea.fr). It provides various tools for: - data analysis - sampling - statistical modeling - optimisation - sensitivity analysis - uncertainty analysis - running code on high performance computers - etc. Thanks to ROOT, it is easily scriptable in CINT (c++ like syntax) and Python. ... -
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Eventer
Rapid, unbiased, reproducible analysis of synaptic events
...Please visit the official Eventer website for more info https://eventerneuro.netlify.app/ While the paper is in preparation, please cite as; Winchester, G., Liu, S., Steele, O.G., Aziz, W. and Penn, A.C. (2020) Eventer. Software for the detection of spontaneous synaptic events measured by electrophysiology or imaging. http://doi.org/10.5281/zenodo.3991676 -
Easy-to-Use Website Accessibility WidgetAll in One Accessibility is an AI based accessibility tool that helps organizations to enhance the accessibility and usability of websites quickly.
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DocWire SDK
Award-winning modern data processing SDK in C++20
DocWire SDK, a standout C++20AI driven data processing tool, has received award from SourceForge and strong backing from Microsoft. It handles nearly 100 file types, empowering efficient text extraction, web data extraction, and document analysis. For businesses, the shift to DocWire SDK signifies a leap forward. It promises comprehensive document format support and the ability to extract valuable insights from email boxes, databases, and websites using cutting-edge AI. DocWire SDK aims to... -
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MTTK Open BI
A user-friendly lightweight BI tool.
...It is a set of plugins of MTTK Lowcode Engine, so the user manual and develop manual are combined together with MTTK Low Code Engine. Code repository: https://github.com/jamie-mttk/mttk-lowcode-designer Online demo available at http://139.129.210.30:8825 (First visit may be slow) Username: admin Password: 123456 Lightweight No data processing engine offered, all the data processing depends on the target Databse Server. Easy to use For example ,to build an echart need to provide many many configurtaions/options, such as title location, grid position,etc. ... -
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AlphaPlot
Interactive scientific graphing and data analysis software.
...Scripting Console support in-place evaluation of mathematical expressions and scrtipting interface to ECMAScript like dynamic scripting language(java script). The GUI of the application uses the Qt toolkit. Periodic test builds are available here http://alphaplot.sourceforge.net/test-build.html -
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DBSolveOptimum
The software for systems biology/pharmacology modeling
...By this time, DBSolveOptimum has been successfully tested and applied for the development and analysis of both systems pharmacology and conventional PK/PD models of drugs. It is free for academic and industrial use. http://www.ncbi.nlm.nih.gov/pubmed/20698988 -
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...Main articles: -) TXM-Wizard: a program for advanced data collection and evaluation in full-field transmission X-ray microscopy, Journal of Synchrotron Radiation, 19, 281-287. (2012) http://scripts.iucr.org/cgi-bin/paper_yard?hf5192 -) 3D elemental sensitive imaging using transmission X-ray microscopy, Analytical and Bioanalytical Chemistry, Volume 404, Issue 5, pp 1297-1301 (2012) http://link.springer.com/article/10.1007%2Fs00216-012-5818-9 -) Three-dimensional imaging of chemical phase transformations at the nanoscale with full-field transmission X-ray microscopy, Journal of Synchrotron Radiation, 18, 773-781. (2011) http://scripts.iucr.org/cgi-bin/paper?...
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Simplify Purchasing For Your BusinessSimplify every aspect of buying for your business in Order.co. From sourcing products to scaling purchasing across locations to automating your AP and approvals workstreams, Order.co is the platform of choice for growing businesses.
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MS Data Miner
MS Data Miner - A web-based proteomics software
...The software is described in the following paper: Dyrlund TF, Poulsen ET, Scavenius C, Sanggaard KW, Enghild JJ. MS Data Miner: A web-based software tool to analyze, compare and share mass spectrometry protein identifications. PROTEOMICS 2012 http://www.ncbi.nlm.nih.gov/pubmed/22833312 -
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Epidat
Statistical data analysis
Programa multiplataforma de libre distribución para el análisis estadístico y epidemiológico de datos. Free distribution cross-platform program for statistical and epidemiological analysis of data. Sitio web: http://www.sergas.es/Saude-publica/EPIDAT Souceforge: https://sourceforge.net/projects/epidat/ Wikipedia: https://es.wikipedia.org/wiki/Epidat -
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The purpose of stellaR is to provide a tool to read a dynamic simulation model, developed in STELLA, and then translate it into a script that can be executed in R (a powerful data analysis and visualizaion environment - http://www.r-project.org/).
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X-SOCS
X-ray Strain Orientation Calculation Software
The X-ray Strain Orientation Calculation Software (X-SOCS) is a user-friendly software, developed for automatic analysisof 5D sets of data recorded during continuous mapping measurements. X-SOCS aims at retrieving strain and tilt maps of nanostructures, films, surfaces or even embedded structures. For more information: http://scripts.iucr.org/cgi-bin/paper?S1600576714004506 To download the latest version of XSOCS (D. Naudet, T. Vincent, M.I. Richard, G. Chahine), follow the instruction in the following link: https://gitlab.esrf.fr/kmap/xsocs You can find on youtube video tutorials explaining the main steps to follow for a standard KMAP data analysis. ... -
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QuickRNASeq
A pipeline for large scale RNA-seq data analysis
...Our pipeline significantly lifts large-scale RNA-seq data analysis to the next level of automation and visualization. Please take a look at our test run project report and get a taste of its rich interactive visualization features. http://baohongz.github.io/QuickRNASeq QuickRNASeq user guide can be downloaded or is accessible online as well http://baohongz.github.io/QuickRNASeq/guide.html For more on QuickRNASeq, please see our paper http://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-015-2356-9 Enjoy QuickRNASeq -
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SHORE is a Next Generation Sequencing data analysis suite. Please find the manual at http://shore.sourceforge.net/wiki
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MS2Browser
LC-MS/MS data browser designed for siderophore analysis
...The program is written in MatLab and it was designed for the analysis of siderophores (iron transporting small molecules) in bacterial media. Some of the functionality and use of MS2Browser is described as part as an open-access book chapter: http://www.intechopen.com/books/applications-from-engineering-with-matlab-concepts/small-molecule-lc-ms-ms-fragmentation-data-analysis-and-application-to-siderophore-identification A siderophore structural database assembled for this project can be found alongside the MS2Browser software (.cfw format to be used with ChemBioFinder(TM) ). ... -
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SampleSpecificDBGenerator
Generates custom UniProt-XML databases from RNA-Seq data
SampleSpecificDBGenerator is a program that takes RNA sequencing data analysis results and translates them into protein database entries that are appended to a UniProt-XML file. This XML is condensed, meaning that much of the extraneous author information in UniProt-XMLs is removed for faster search times in Morpheus. Please cite http://pubs.acs.org/doi/abs/10.1021/acs.jproteome.5b00817. -
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Lab Processes
Rediscover the Simplicity http://www.atgclabs.com/
Help us to improve Lab Processes. We want to hear your feedback! Request new Lab Processes feature or module and receive a free Single User version with new feature. https://www.atgclabs.com/products/lp Lab Processes is a comprehensive and straightforward application specially designed for biologists and chemists who need to conduct a wide variety of tests and experiments on animals. Lab Processes requires minimal computing skills. Genetic and physiological data can be entered either... -
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jChIP
Graphical environment for exploratory ChIPSeq data analysis
...In addition it computes statistics of the number of loci/positions containing specified amount of tags. jChIP is able to load data in several common formats (SAM, BAM, WIG, BED, Bowtie) and download loci definitions directly from the Ensembl database. http://www.biomedcentral.com/1756-0500/7/676 -
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PRADA
PRADA : Pipeline for RNA-Sequencing Data Analysis
Massively parallel sequencing of cDNA reverse transcribed from RNA (RNASeq) provides an accurate estimate of the quantity and composition of mRNAs. To characterize the transcriptome through the analysis of RNA-seq data, we developed PRADA. PRADA focuses on the processing and analysis of gene expression estimates, supervised and unsupervised gene fusion identification, and supervised intragenic deletion identification. PRADA currently supports 7 modules to process and identify... -
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Grid3D Toolbox
3D grid toolbox for analysis of molecular simulations
"Grid3D Toolbox" is a set of command line tools for visualization and analysis of the results of molecular simulations based on 3-dimensional density maps (grids). Currently, the tools only work with the simulation trajectories generated by the GROMACS simulation package (http://www.gromacs.org/). The generated density maps are saved in the Grid3D native .g3d format and can be visualized using a third party data visualization software. A converter from the .g3d format to .vti, an XML based format of the VTK library is provided with the "Grid3D Toolbox", so that the generated density maps can be visualized using the ParaView data analysis and visualization software (http://www.paraview.org). ... -
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xSonify
Java-based sonification data analysis
xSonify is a Java-based sonification data analysis prototype for displaying science data as sounds, with an emphasis on supporting visually-impaired researchers. Alternatives include Sonification Sandbox <http://sonify.psych.gatech.edu/research/>, MathTrax and Earth Plus <http://prime.jsc.nasa.gov/>, Sonifyer <http://www.sonifyer.org> and SoniPy <http://sourceforge.net/projects/sonipy/>. More at the main forum for sonification, ICAD <http://icad.org> -
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ViStream (http://davis.wpi.edu/xmdv/downloads/) is a tool for the visual analysis of multivariate streaming data. It supports a number of computational data analysis methods and provides numerous visualizations and interactions for exploring dynamic data.
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feed4weka is an open library that enriches weka (http://www.cs.waikato.ac.nz/ml/weka/), an open source project for data analysis. It integrates new classification and clustering algorithms, and adds the coclustering and outlier detection frameworks
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mendelFix
Correction of SNP Mendelian errors in trio data
...Utsunomiya YT, Alonso RV, Carmo AS, Campagnari F, Visintin J, Garcia JF (2013). mendelFix: a Perl script for checking Mendelian errors in high density SNP data of trio designs. arXiv:1306.2243. You can find our paper at http://arxiv.org/abs/1306.2243.
