Search Results for "bcftools-windows"
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Showing 67 open source projects for "bcftools-windows"
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pandas
Fast, flexible and powerful Python data analysis toolkit
pandas is a Python data analysis library that provides high-performance, user friendly data structures and data analysis tools for the Python programming language. It enables you to carry out entire data analysis workflows in Python without having to switch to a more domain specific language. With pandas, performance, productivity and collaboration in doing data analysis in Python can significantly increase. pandas is continuously being developed to be a fundamental high-level building... -
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Orange Data Mining
Orange: Interactive data analysis
Open source machine learning and data visualization. Build data analysis workflows visually, with a large, diverse toolbox. Perform simple data analysis with clever data visualization. Explore statistical distributions, box plots and scatter plots, or dive deeper with decision trees, hierarchical clustering, heatmaps, MDS and linear projections. Even your multidimensional data can become sensible in 2D, especially with clever attribute ranking and selections. Interactive data exploration for... -
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scikit-learn
Machine learning in Python
scikit-learn is an open source Python module for machine learning built on NumPy, SciPy and matplotlib. It offers simple and efficient tools for predictive data analysis and is reusable in various contexts. -
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Dash
Build beautiful web-based analytic apps, no JavaScript required
Dash is a Python framework for building beautiful analytical web applications without any JavaScript. Built on top of Plotly.js, React and Flask, Dash easily achieves what an entire team of designers and engineers normally would. It ties modern UI controls and displays such as dropdown menus, sliders and graphs directly to your analytical Python code, and creates exceptional, interactive analytics apps. Dash apps are very lightweight, requiring only a limited number of lines of Python or... -
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Timesketch
Collaborative forensic timeline analysis
Timesketch is a collaborative forensic timeline analysis platform used to investigate security incidents by turning diverse evidence into a single, searchable chronology. Analysts ingest logs and artifacts from many sources—endpoints, servers, cloud services—and Timesketch normalizes them into events on a unified timeline. Powerful search, aggregations, and saved views help you pivot quickly, highlight anomalies, and preserve investigative steps for later review. The system supports tagging,... -
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Python for Data Analysis
Materials and IPython notebooks for "Python for Data Analysis"
Python for Data Analysis is the official companion repository for Python for Data Analysis, 3rd Edition by Wes McKinney. It contains the datasets, examples, and IPython notebooks used throughout the book. The repository helps readers practice Python data analysis concepts directly in Jupyter Notebook. Its chapters cover Python basics, NumPy, pandas, data loading, cleaning, wrangling, visualization, time series, modeling libraries, and full analysis examples. The project includes setup... -
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Astropy
Repository for the Astropy core package
The Astropy Project is a community effort to develop a common core package for Astronomy in Python and foster an ecosystem of interoperable astronomy packages. Astropy is a Python library for use in astronomy. Learn Astropy provides a portal to all of the Astropy educational material through a single dynamically searchable web page. It allows you to filter tutorials by keywords, search for filters, and make search queries in tutorials and documentation simultaneously. The Anaconda Python... -
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JS Analyzer
Burp Suite extension for JavaScript static analysis
JS Analyzer is a powerful static analysis tool implemented as a Burp Suite extension that helps security researchers and web developers automatically uncover important artifacts in JavaScript files during web application testing. It parses JavaScript responses intercepted by Burp Suite and intelligently extracts API endpoints, full URLs (including cloud storage links), secrets like API keys or tokens, and email addresses while filtering out noise from irrelevant code patterns. The extension... -
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Cookiecutter Data Science
Project structure for doing and sharing data science work
A logical, reasonably standardized, but flexible project structure for doing and sharing data science work. When we think about data analysis, we often think just about the resulting reports, insights, or visualizations. While these end products are generally the main event, it's easy to focus on making the products look nice and ignore the quality of the code that generates them. Because these end products are created programmatically, code quality is still important! And we're not talking... -
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Pandas Profiling
Create HTML profiling reports from pandas DataFrame objects
pandas-profiling generates profile reports from a pandas DataFrame. The pandas df.describe() function is handy yet a little basic for exploratory data analysis. pandas-profiling extends pandas DataFrame with df.profile_report(), which automatically generates a standardized univariate and multivariate report for data understanding. High correlation warnings, based on different correlation metrics (Spearman, Pearson, Kendall, Cramér’s V, Phik). Most common categories (uppercase, lowercase,... -
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F1 Race Replay
An interactive Formula 1 race visualisation and data analysis tool
F1 Race Replay is an interactive replay viewer that lets users watch and analyze recorded Formula 1 race sessions with precise control over camera angles, timing, and telemetry overlay, offering a rich experience beyond standard broadcast replays. It ingests official timing and positional data, then renders vehicle movements through track maps and 3D visualizations so fans, analysts, and engineers can review strategy, overtakes, tire degradation effects, and pit stop impacts in detail. Users... -
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Sweetviz
Visualize and compare datasets, target values and associations
Sweetviz is an open-source Python library that generates beautiful, high-density visualizations to kickstart EDA (Exploratory Data Analysis) with just two lines of code. Output is a fully self-contained HTML application. The system is built around quickly visualizing target values and comparing datasets. Its goal is to help quick analysis of target characteristics, training vs testing data, and other such data characterization tasks. Shows how a target value (e.g. "Survived" in the Titanic... -
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SageMaker Spark Container
Docker image used to run data processing workloads
Apache Spark™ is a unified analytics engine for large-scale data processing. It provides high-level APIs in Scala, Java, Python, and R, and an optimized engine that supports general computation graphs for data analysis. It also supports a rich set of higher-level tools including Spark SQL for SQL and DataFrames, MLlib for machine learning, GraphX for graph processing, and Structured Streaming for stream processing. The SageMaker Spark Container is a Docker image used to run batch data... -
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PySchool
Installable / Portable Python Distribution for Everyone.
PySchool is a free and open-source Python distribution intended primarily for students who learn Python and data analysis, but it can also used by scientists, engineering, and data scientists. It includes more than 150 Python packages (full edition) including numpy, pandas, scipy, sympy, keras, scikit-learn, matplotlib, seaborn, beautifulsoup4... -
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LabPlot
Data Visualization and Analysis
LabPlot is a FREE, open source and cross-platform Data Visualization and Analysis software accessible to everyone. -
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xrayutilities
a package with useful scripts for X-ray diffraction physicists
....); convert them to reciprocal space for arbitrary goniometer geometries and different detector systems (point, linear as well as area detectors); for further processing the data can be gridded (transformed to a regular grid). More detailed description as well as documentation can be found at webpage http://xrayutilities.sourceforge.io/. Downloads for windows can be found on http://pypi.python.org/pypi/xrayutilities Development is performed on github: https://github.com/dkriegner/xrayutilities -
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relax
Molecular dynamics by NMR data analysis
The software package 'relax' is designed for the study of molecular dynamics through the analysis of experimental NMR data. Organic molecules, proteins, RNA, DNA, sugars, and other biomolecules are all supported. It supports exponential curve fitting for the calculation of the R1 and R2 relaxation rates, calculation of the NOE, reduced spectral density mapping, the Lipari and Szabo model-free analysis, study of domain motions via the N-state model and frame order dynamics theories using... -
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FreeSEM
Free and open-source desktop application designed for SEM
FreeSEM is a free, open-source desktop application designed for researchers and students to perform Structural Equation Modeling (SEM) for statistical and research analysis. It allows users to visually build models using a drag-and-drop interface to create path diagrams and analyze relationships between observed and latent variables. The software supports methods such as exploratory factor analysis, covariance-based SEM, partial least squares SEM, and meta-SEM, and it provides model fit... -
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sadsa
SADSA (Software Application for Data Science and Analytics)
SADSA (Software Application for Data Science and Analytics) is a Python-based desktop application designed to simplify statistical analysis, machine learning, and data visualization for students, researchers, and data professionals. Built using Python for the GUI, SADSA provides a menu-driven interface for handling datasets, applying transformations, running advanced statistical tests, machine learning algorithms, and generating insightful plots — all without writing code. -
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Uranie
Uranie is CEA's uncertainty analysis platform, based on ROOT
...It provides various tools for: - data analysis - sampling - statistical modeling - optimisation - sensitivity analysis - uncertainty analysis - running code on high performance computers - etc. Thanks to ROOT, it is easily scriptable in CINT (c++ like syntax) and Python. Is is available both for Unix and Windows platforms (a dedicated platform archive is available on request). Note : if you have downloaded version 3.12 before the 8th of february, a patch exists for a minor bug on TOutputFileKey file, don't hesitate to ask us. -
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DataPrep
Python-based data preprocessing tool
DataPrep v0.2 is a Tkinter-based GUI application/tool designed to assist users in data preprocessing, multicollinearity removal, and feature selection for a wide range of applications in Cheminformatics, Bioinformatics, Data Analysis, Feature Selection, Molecular Modeling, Machine Learning, and Quantitative-structure-property relationship (QSPR) studies. It includes functionality to load, process, and save datasets with support for different preprocessing & multicollinearity removal... -
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Data Preprocessing Automate
Data Preprocessing Automation: A GUI for easy data cleaning & visualiz
Data Preprocessing Automation is a Python-based GUI application designed to simplify and automate data preprocessing tasks. It allows users to upload Excel files, automatically handle missing values, remove duplicates, and detect and remove outliers using statistical methods. The application provides data visualization tools, including box plots for distribution analysis and scatter plots for exploring relationships between variables. Users can download the processed data for further... -
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airda
airda(Air Data Agent
airda(Air Data Agent) is a multi-smart body for data analysis, capable of understanding data development and data analysis needs, understanding data, generating data-oriented queries, data visualization, machine learning and other tasks of SQL and Python codes. -
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Python Laboratory Operations Toolkit
many useful snippets for using python in a laboratory
A toolkit of Python software useful in a laboratory data acquisition and analysis environment. Includes support for such protocols as VXI-11 (and its extension, LXI), Vernier LabPro (now very old), and National Instruments DSTP (now very old). Also includes data analysis and modelling tidbits. Python3 updates are on the way in the very near future for the biggest packages. the vxi11 package is fully up-to-date, although see the blog post about python 3.13 -
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PyNanoLab
data analysis and Visualization with matplotlib
PyNanoLab contains a variety of tools to complete the data analysis, statistics, curve fitting, and basic machine learning application. Visualization in pynanolab is based on matplotlib. The setup tools is desinged to control and set-up all the details of the figure with a GUI.
