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ProteoWizard development moved to GitHub in 2018.
The ProteoWizard Library is a set of software libraries and tools for rapid development of proteomics data analysis software.
The libraries are cross-platform and built from the ground up using modern C++ techniques.
iAIDA is a C++ implementation of the AIDA interfaces.
iAIDA is an implementation in C++ of the AIDA Abstract Interfaces for Data Analysis, a set of interfaces designed for data analysis. Initially designed for use in experimental and theoretical physics, the AIDA interfaces can also be used in other fields.
BIL++ is a set of standalone C++ packages for data processing in Bioinformatics (Graph mining, Bayesian networks, Genetic algorithm, Discretization, Gene expression data analysis, Hypothesis testing).