Search Results for "interface"

...It supports both over-representation analysis and gene set enrichment analysis, letting you work with unranked gene lists or ranked statistics from differential pipelines. The package connects to multiple knowledge bases—such as Gene Ontology, KEGG, Reactome, Disease Ontology, MeSH and others—through a consistent interface so you can query different biological lenses without rewriting code. It is designed for breadth, covering coding and non-coding features and thousands of organisms by leveraging continuously updated annotations. Results are returned in tidy, manipulation-friendly structures and pair naturally with rich visualization functions (via companion tooling) to summarize pathways, terms, and gene–set relationships.

FlowViewer provides a convenient web-based user interface to Mark Fullmer’s flow-tools suite and CMU's netflow data capture/analyzer, SiLK. The inclusion of the underlying SiLK tool set enables FlowViewer users to continue to use the tool with the newer IPFIX netflow data protocol, which includes support for IPv6 and Cisco's v9 and FNF netflow. FlowViewer has been developed for NASA’s Earth Sciences Data and Information System (ESDIS) networks, and credit goes to NASA for their usual outstanding support of innovation. ...

Glove provides an interface to data acquisition systems, sophisticated (and correct) statistical analysis, a plotting tool, and the ability to easily manipulate the data. Its modular design allows plug-ins for acquisition, manipulation, and analysis. ChangeLog: http://glove.sourceforge.net/ChangeLog.html

GXSM -- Gnome X Scanning Microscopy: A multi-channel image and vector-probe data acquisition and visualization system designed for SPM techniques (STM,AFM..), but also SPA-LEED/LEED/LEEM data analysis. A plug-in interface allows any user add-on data-processing and special hardware and instrument support. Latest: NC-AFM and related explorative methods as SQDM can be configured. High-Speed external PAC-PLL hardware option with digital DSP link. Based on several hardware options it supports a commercially available DSP hardware and provided also Open Source Code for all the low level signal processing tasks and instrument controls in a most flexible and adaptable manner. ...

SciDAVis is a user-friendly data analysis and visualization program primarily aimed at high-quality plotting of scientific data. It strives to combine an intuitive, easy-to-use graphical user interface with powerful features such as Python scriptability.

SFrame is a C++ framework built around the ROOT libraries for analysing particle physics data. It gives a very high performance for processing data, by allowing the user to run his/her code on a distributed farm of machines.

While resting-state fMRI is drawing more and more attention, there has not been a software for its data analysis. Based on MATLAB, we developed a package named REST. Currently REST has three main functions: function connectivity, ReHo and ALFF.

xBCI platform is a platform for developing a BCI (Brain-computer interface) application including data analysis, online system, experiment control and feedback presentation. A BCI system is realized easily using GUI-based editor.

HyPhy is a comprehensive environment for maximum likelihood statistical analysis of genetic sequence data. It includes a large collection of out of the box analyses, a feature-rich graphical user interface for custom data analysis and a scripting languag

GEDAS is a software to perform microarray data analysis with friendly user interface and convenient data display. Currently some commonly used data clustering algorithms have been implemented in this software.

ModuleFair is a generic, module-based framework upon which to quickly build anything from data analysis programs to game level editors. This project is no longer maintained.