Showing 4 open source projects for "disease"

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    clusterProfiler

    clusterProfiler

    A universal enrichment tool for interpreting omics data

    ...It supports both over-representation analysis and gene set enrichment analysis, letting you work with unranked gene lists or ranked statistics from differential pipelines. The package connects to multiple knowledge bases—such as Gene Ontology, KEGG, Reactome, Disease Ontology, MeSH and others—through a consistent interface so you can query different biological lenses without rewriting code. It is designed for breadth, covering coding and non-coding features and thousands of organisms by leveraging continuously updated annotations. Results are returned in tidy, manipulation-friendly structures and pair naturally with rich visualization functions (via companion tooling) to summarize pathways, terms, and gene–set relationships.
    Downloads: 0 This Week
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  • 2

    OptiMIClass

    Automatic n-dimensional data clustering tool powered by five advanced

    ...The software was a direct outcome of “Combinatorial optimization heuristics for data classification” (Code: 5402-1440-3901), and its development continued within the related project “Disease propagation: heuristics applied to optimizing control measures” (Code: 540114404201).
    Downloads: 0 This Week
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  • 3

    Random Bits Regression

    Random Bits Regression is a strong general predictor.

    ...The accuracy and robustness improvement of our method over existing method could bring huge benefits in some critical applications. For example, natural disaster prediction, stock price prediction, personal/population disease prediction. The fast-speed nature of our method not only allows big data analysis but also enables real-time recognition and predictions. The RBR framework also hints the mechanism of brain function and leads to a "wide learning" hypothesis. We believe that this method will make a great impact and enable many downstream applications.
    Downloads: 0 This Week
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  • 4

    ExAM-Exome_Analysis_And_Mining

    A whole exome sequencing analysis package and its graphical interface

    ...Here, we present an interactive and free analysis package, ExAM, dedicated to whole exome sequencing data analysis. It is accessible to non-computer scientists and provides a complete set of information, as well as decision support to prioritize candidate disease causing variants.
    Downloads: 0 This Week
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