Search Results for "gnu science"
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Showing 27 open source projects for "gnu science"
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C3D is a command-line tool for converting 3D images between common file formats. The tool also includes a growing list of commands for image manipulation, such as thresholding and resampling.
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Mesh2HRTF is an open-source project aiming at providing an easy-to-use software package for the numerical calculation of HRTFs. It targets researchers in the field of binaural audio. In a nutshell, Mesh2HRTF simply reads geometrical data, calculates the corresponding sound field and outputs HRTFs. To support multiple computer platforms, the concept of Mesh2HRTF is to focus on a command-line tool, which forms the numerical core, i.e., an implementation of the 3-dimensional Burton-Miller...
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progrep
Utility to show live progress, status & stats for running simulations
progrep is a command-line tool (Linux) to show live progress report, status & stats of a running simulation or compute job that executes a given number of iterations. It shows % completed, time remaining, time elapsed, number of threads, MPI_Rank(if any), CPU usage & speed (FPS). The FPS measures may be used in benchmarking, e.g. while optimizing HPC algorithms for performance. progrep supports both single-threaded and parallel (multicore/multinode - e.g. OpenMP/MPI) jobs. progrep can... -
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A command-line tool for numerical reconstruction of digital holograms (formerly known as "HoloPlay")
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cocolib / light field suite
CUDA library for continuous optimization and light field analysis
Library for continuous convex optimization in image analysis, together with a command line tool and Matlab interface. Implements several recent algorithms for inverse problems and image segmentation with total variation regularizers and vectorial multilabel transition costs. Also included is a suite for variational light field analysis, which ties into the HCI light field benchmark set and givens reference implementations for a number of our recently published algorithms. *** NOTE: ... -
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FractalNow
Fast, advanced, multi-platform fractal generator
FractalNow provides users with tools to generate pictures of various types of fractals quickly and easily. It is made of both a command line tool, FractalNow, and a graphical tool, QFractalNow. The graphical tool, based on Qt library, allows users to explore fractals intuitively and generate pictures. Both tools are entirely multi-threaded and implement advanced algorithms and heuristics that make computation very fast compared to most existing free fractal generators. -
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PingPongPro
Find ping-pong signatures like a pro
IMPORTANT NOTE: This project has been migrated to GitHub and is no longer maintained here. Please refer to: https://github.com/suhrig/pingpongpro Piwi-interacting RNAs (piRNAs) are a class of small non-coding RNAs, predominantly active in the germ line. There, they limit the detrimental effect of transposons on the genome. They do so by forming a complex with Piwi proteins. The complex binds and then cleaves mRNA molecules of active transposons. The resulting mRNA fragments induce the... -
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ncclamp is a command-line tool for NetCDF files that allows you to replace values in-place for a variable given the old value to be replaced, the new value, and a comparison operator. The change is applied across all of the variable's dimensions.
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mwetoolkit
THIS PROJECT MIGRATED TO https://gitlab.com/mwetoolkit/mwetoolkit3/
THIS PROJECT MIGRATED TO https://gitlab.com/mwetoolkit/mwetoolkit3/ The Multiword Expressions toolkit aids in the automatic identification and extraction of multiword units in running text. These include idioms (kick the bucket), noun compounds (cable car), phrasal verbs (take off, give up), etc. Even though it focuses on multiword expresisons, the framework is quite complete and can also be useful in any corpus-based study in computational linguistics. The mwetoolkit can be... -
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dBASE Reader and Converter
!!! NO LONGER MAINTAINED !!!
dbf is an easy-to-use command line tool to show and convert the content of dBASE III, IV, and 5.0 files. It reads dBASE databases and prints the content to the screen or converts it to comma-separated (*.csv) files which can be opened in Excel, Calc. -
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Dantzig-Wolfe Solver
An implementation of Dantzig-Wolfe decomposition built upon GLPK
An implementation of Dantzig-Wolfe decomposition built upon the GNU Linear Programming Kit. This is a command line tool for solving properly decomposed linear programs. There are several examples and some documentation to guide the use of this solver. Forked over to GitHub (see link). -
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NoiseGen
Command-line tool to generate 1D, 2D, or 3D noise textures
Do not use this project. Go to the homepage listed above. -
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A small command line tool to process streams of numbers and spit out the running total, bin the results or merge duplicates. Supports arbitrary precision numbers. ocdf is named for the cumulative distribution function in probability.
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The SBML ODE Solver is a command-line tool and programming library (ISO/ANSI C) for construction and numerical integration of an ODE system, derived from an SBML based description of a biochemical reaction network. Development has moved to https://github.com/raim/SBML_odeSolver . Please download the latest version from there!
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BBSGen is an improved Blum-Blum-Shub pseudorandom number generator. It consists of a C library (libbbsgen) and command-line tool (bbsgen). BBSGen can be used in applications and command-line as secure, unpredictable and strong PRNG.
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bc2ld is a command line tool to translate molecular database files from BASECOL (obs. of Paris) to LAMDA format (Leiden University). This command line tool has academic use purposes.
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This is a small and fast library and command-line tool for manipulation of logic/boolean-algebra expressions, including proofing and simplification. A front-end using tigcc for Texas Instruments calculators is planned, too.
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NOAHDB is a command line tool that parses the log files that are emitted by the Argos Honeypot and populates the tables of a MySQL database.
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A cross-platform, lightweight, command-line tool for synchronizing a source and a target directory. It is easy to use and ideal for non-interactive scripts to synchronize two directories. It incorporates a time window to avoid FAT partitions problems.
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The objective is to create a Unix style command line tool, capable of distributing independent operations of a trivially parallel process over each processor in a Symmetric multiprocessing machine in effort to expedite job completion.
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RepeatFinder is a command line tool for generating non-overlapping matches of microsatellite DNA from FASTA format code.
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"eccvs" is a GUI based version control system (for linux) that keeps track of all the resources of a software project. Here resources mean source code, documentation, etc., This software is based on the existing CVS command line tool.
