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Showing 13 open source projects for "parallel"
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Electronic Lab Notebook (ELN) SoftwareeLabJournal is an all-in-one Electronic Lab Notebook (ELN) software that includes sample tracking and protocol management modules.
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mprocs
Run multiple commands in parallel
mprocs runs multiple commands in parallel and shows output of each command separately. When you work on a project you very often need the same list of commands to be running. For example: webpack serve, just --watch, node src/server.js. With mprocs you can list these commands in mprocs.yaml and run all of them by running mprocs. Then you can switch between the outputs of running commands and interact with them. -
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Percollate
A command-line tool to turn web pages into beautiful, readable PDF
Percollate is a command-line tool that turns web pages into beautifully formatted PDF, EPUB, or HTML files. By default, percollate processes URLs in parallel. Use the --wait option to process them sequentially instead, with a pause between items. The delay is specified in seconds, and can be zero. By default, percollate bundles all web pages in a single file. Use the --individual flag to export each source to a separate file. Additional CSS styles you can pass from the command line to override styles specified by the default/custom stylesheet. ... -
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Notcurses
blingful character graphics/TUI library. definitely not curses
A library facilitating complex TUIs on modern terminal emulators, supporting vivid colors, multimedia, threads, and Unicode to the maximum degree possible. Things can be done with Notcurses that simply can't be done with NCURSES. It is furthermore fast as shit. What it is not: a source-compatible X/Open Curses implementation, nor a replacement for NCURSES on existing systems. Notcurses abandons the X/Open Curses API bundled as part of the Single UNIX Specification. For some necessary... -
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Prowler
An open source security tool to perform AWS security assessment
Prowler is an Open Source security tool to perform AWS security best practices assessments, audits, incident response, continuous monitoring, hardening, and forensics readiness. It contains more than 200 controls covering CIS, PCI-DSS, ISO27001, GDPR, HIPAA, FFIEC, SOC2, AWS FTR, ENS and custom security frameworks. Prowler is a command-line tool that helps you with AWS security assessment, auditing, hardening, and incident response. It follows guidelines of the CIS Amazon Web Services... -
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xjobs
Command line tool to run batches of jobs in parallel.
xjobs has a command line interface similar to xargs to start processes, but runs processes in parallel and provides enhanced concepts for I/O redirection. -
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progrep
Utility to show live progress, status & stats for running simulations
...It shows % completed, time remaining, time elapsed, number of threads, MPI_Rank(if any), CPU usage & speed (FPS). The FPS measures may be used in benchmarking, e.g. while optimizing HPC algorithms for performance. progrep supports both single-threaded and parallel (multicore/multinode - e.g. OpenMP/MPI) jobs. progrep can also report for jobs running on remote hosts, e.g. jobs running on Linux Clusters. progrep works in client-server model. The server can be installed in your simulation source code with only 4 extra lines (API). When the progrep command is invoked, it queries this server as a client. progrep does not interfere with or slow down your simulation when not invoked. ... -
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lzhw
LZHW Windows command line lossless compression tool for tabular files
LZHW Command Line Lossless Compression Tool is a Windows command line tool used to compress and decompress files from and to any form, csv, excel etc without any dependencies or installations. Using an optimized algorithm (LZHW) developed from Lempel-Ziv, Huffman and LZ-Welch algorithms. The tool can work in parallel and most of its code is written in Cython, so it is pretty fast. It is based on python lzhw library. Full tool documentation can be found at: https://mnoorfawi.github.io/lzhw/6%20Using%20the%20lzhw%20command%20line%20tool/ While the documentation for the python library is at: https://mnoorfawi.github.io/lzhw/ -
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Flightplan
Run sequences of shell commands against local and remote hosts
A task automation and deployment tool for Node.js, allowing developers to execute remote SSH commands and manage deployments efficiently. -
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...Essentially, pdfsandwich is a wrapper script which calls the following binaries: convert, unpaper, tesseract, gs, and hocr2pdf (if tesseract < 3.03). It is known to run on Unix systems and has been tested on Linux and MacOS X. It supports parallel processing on multiprocessor systems. In contrast to most competing sandwich programs, it performs preprocessing of the scanned images, such as de-skewing or removal of dark edges etc. For further information please read the manual: http://www.tobias-elze.de/pdfsandwich/index.html
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bashful
Use a yaml file to stitch together commands and bash snippits
bashful is a command-line tool written in Go that allows you to define your build, automation or scripting workflow declaratively in YAML and have tasks executed in either series or parallel, with pretty progress output, logging, error handling, and orchestration instead of manually writing large bash scripts. The idea is that your bash automation should be “quiet and shy-like” rather than verbose and messy, so bashful provides a structured way to describe tasks (commands, downloads, nested operations) in a YAML file, and then run them with a nice terminal UI showing progress bars, logs, ETAs, etc. ... -
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Pipeline Builder for NGS tools
Scripting tool for automatize and managing complex NGS analysis
Handling with NGS tool configuration files is a real challenge for modern biologists and biotechnologist. To increase productivity, specificity and enhance the data processing, this tool provides a collection of commands already structured, leading the user in building the correct pipeline for the data he has to analyse. Pipeline Builder is a scripting tool for managing complex NGS analysis pipelines. It helps the user in composing NGS tool commands and composing his own analysis... -
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Dantzig-Wolfe Solver
An implementation of Dantzig-Wolfe decomposition built upon GLPK
An implementation of Dantzig-Wolfe decomposition built upon the GNU Linear Programming Kit. This is a command line tool for solving properly decomposed linear programs. There are several examples and some documentation to guide the use of this solver. Forked over to GitHub (see link). -
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The objective is to create a Unix style command line tool, capable of distributing independent operations of a trivially parallel process over each processor in a Symmetric multiprocessing machine in effort to expedite job completion.
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