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Brew PHP switcher is a simple shell script to switch your apache and CLI quickly between major versions of PHP. If you support multiple products/projects that are built using either brand new or old legacy PHP functionality. For users of Homebrew (or brew for short) currently only. If you support multiple products/projects that are built using either brand new or old legacy PHP functionality and you find it a pain to change config files continually this will make the whole process just one command. ...

Platypus is a developer tool that creates native Mac applications from command line scripts such as shell scripts or Python, Perl, Ruby, Tcl, JavaScript, and PHP programs. This is done by wrapping the script in an application bundle along with a slim app binary that runs the script. Platypus makes it easy to share scripts and programs with people who are unfamiliar with the command line interface. Native, user-friendly applications can be created with a few clicks. It is very easy to create installers, droplets, administrative applications, login items, status menu items, launchers, and automation using Platypus.

If you manage phylogenetic data, Bio::NEXUS can make your life easier with a library and ready-made tools to manipulate and visualize NEXUS files (see http://www.molevol.org/nexplorer and http://search.cpan.org/dist/Bio-NEXUS/doc/Tutorial.pod).