Search Results for "bmc"

This repository is a collection of lecture notes and code on scientific computing and data analysis for Biomechanics and Motor Control.

The pyARS python module allows developers to use BMC's ARSystem (Remedy ARS) and Atrium CMDB functions from within Python. Using Python's interactive shell, it is extremely easy to retrieve and modify data entries as well as workflow objects. ARSystem, also known as ARS or Remedy, is a powerful enterprise workflow engine. Atrium is a Configuration Management Data Base, a.k.a. Installed Base built on top of ARSystem.

...Two methods are made available for which their efficiency is strongly dependent on the topology of the defined network: the combinatorial Hill technique and the Monte Carlo simulation method. References: M. Torchala, P. Chelminiak, M. Kurzynski and P. A. Bates, 'RaTrav: a tool for calculating mean first-passage times on biochemical networks', BMC Syst. Biol. 7, 130 (2013). M. Torchala, P. Chelminiak and P. A. Bates, 'Mean first-passage time calculations: comparison of the deterministic Hill's algorithm with Monte Carlo simulations', Eur. Phys. J. B 85, 116 (2012).

An R package that performs forward-backward fragment assembling segmentation. Reference: BMC Bioinformatics. 2007 May 3;8:145.

Pure Perl module to interface with the BMC Impact Manager Web Services (IIWS) to send and receive events and data, run queries, etc. Note that this project is in a very early stage of development.

This is the high throughput PCR primer design software that is used at the J. Craig Venter Institute. See: Li K, et al. "Novel computational methods for increasing PCR primer design effectiveness in directed sequencing". BMC Bioinformatics 2008, 9:191.

CNV Workshop is a web-enabled platform for analyzing genome variation such as copy number variation (CNV). Learn about CNV Workshop in our associated BMC Bioinformatics manuscript: http://www.biomedcentral.com/1471-2105/11/74

DeployAgility changes the build and deployment paradigm. Instead of enabling a "Tower of Babel" in which each development team duplicates efforts to create its own automated build and deployment process, DeployAgility inverts this practice.

CoCOOT is an extended collaboration system of COOT(Crystallographic Object Oriendted Toolit). It operates an add-on of original Coot. It enables to collaboration through internet.