Showing 138 open source projects for "java open source"

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  • 1
    The development and curation of a range of XML-based tools for using Chemical Markup Language (CML), including XSD XML Schemas for validation, datatyping and constraining CML documents and XSLT Stylesheets for transforming, filtering and rendering.
    Downloads: 9 This Week
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  • 2
    primeHandle is a set of data management tools in support of the PrIMe Initiative (http://primekinetics.org). primeHandle includes graphical user interfaces for searching through data collections, editing and submitting data to the PrIMe Data Depository.
    Downloads: 0 This Week
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  • 3
    The Molwind project aims at developing Open Source software to visualize relationships among molecular entities such as chemical structures on the basis of NASA WorldWind. Different levels of complexity get visible by zooming in areas of interest.
    Downloads: 0 This Week
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  • 4
    Source code for the Chemical Informatics and Cyberinfrastructure Collaboratory project.
    Downloads: 0 This Week
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  • 5
    NMRShiftDB
    NMRShiftDB is an open-source, open-access, open-submission, open-content web database for chemical structures and their nuclear magnetic resonance data.
    Downloads: 0 This Week
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  • 6
    OpenOffice.org extension for creation and editing of chemical structures embedded into OOo documents
    Downloads: 0 This Week
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  • 7
    MetaPrint2D is a tool for predicting sites of xenobiotic metabolism.
    Downloads: 0 This Week
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  • 8
    QSAR is a project that aims to build a GUI that enables people to build quantitative structure activity (or property) relationship models. It will use parts of CDK (cdk.sf.net), JOELib (joelib.sf.net), R (www.r-project.org) and other projects.
    Downloads: 0 This Week
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  • 9
    A Java program to paint the experimental and theoretical data obtained of STM and AFM.
    Downloads: 0 This Week
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  • 10
    LaJolla can perform 3D alignments of RNA and protein structures. It is fast, simple to use and well tested. LaJolla is successfully published in a peer reviewed journal. !!!!!! PROJECT MOVED TO GITHUB !!!!!! Please check out http://raphaelbauer.github.io/lajolla/
    Downloads: 0 This Week
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  • 11
    Periodic Table
    Periodic table of the chemical elements for Java (J2ME) enabled devices. http://kenai.com/projects/periodic/pages/Home
    Downloads: 1 This Week
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  • 12
    A sorting tool for Bioinformatics, Biochemistry and/or Molecular biology. This sorts nucleotide sequences aligned using "ClustalW". There may be a way to do this w/ original app, but someone I know couldn't figure out how - thus this project was born
    Downloads: 0 This Week
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  • 13
    Ever got confused while remembering all the various physical properties of all the standard 20 amino acids? Then use Amino Acid Finder!! It has a built-in database and contains information about all the physical properties and lets you to search them
    Downloads: 0 This Week
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  • 14
    Shape is a molecular conformation prediction program. It uses a genetic algorithm to efficiently search the conformational space of a biomolecule and then clusters the results. It is very simple to use.
    Downloads: 0 This Week
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  • 15
    Calculating 2D-Gray-scale bitmaps Calculation of a 3D-rotation-body form a detected area by using different image processing algorithms. Developed for the German Aerospace Center (DLR). Used Projects: Substance (GUI)
    Downloads: 0 This Week
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  • 16
    JOELib/JOELib2 is a cheminformatics library which supports SMARTS substructure search, descriptor calculation, processing/filtering pipes, conversion of file formats, 100% pure Java, and interfaces to external programs (e.g. Ghemical) are available.
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    Downloads: 0 This Week
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  • 17
    ScreeningAssistant is a software based on JOELib and dedicated to the management of chemical databases. It allows the user to select a set of compounds for screening tests (High Throughput Screening or Virtual Screening).
    Downloads: 0 This Week
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  • 18

    SciBearSpace

    Clinical Information Management

    Open Source Clinical Information Management System. From research to laboratory. Gathering / storing of analytical data within an SQL database.
    Downloads: 0 This Week
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  • 19
    Chemical Equations with Cows
    Downloads: 0 This Week
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  • 20
    User friendly PDB (Protein Data Bank) file editor with graphic user interface for protein crystallographers to expedite selective parallel edit / data extraction / analysis of their PDB files
    Downloads: 3 This Week
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  • 21
    Mathematics, Chemistry and Bio-informatics semantic knowledge editor and simulation environment. It should serve as interactive science learning program or science classroom notebook and workshop.
    Downloads: 0 This Week
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  • 22
    FreeLIMS  |  Free LIMS

    FreeLIMS | Free LIMS

    Laboratory Information Management System

    FreeLIMS is a Laboratory Information Management System ( LIMS ). Manage samples; create sample types from methods & parameters; easily generate reports & certificates; fine tune user rights. FreeLIMS is Open Source and Free.
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    Downloads: 65 This Week
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  • 23
    4-Dimensional Cell Simulator (4DiCeS) is a framework on hybrid (stochastic and deterministic) modeling and simulation of (whole) cell environments in 4D. The framework may incorporate any reaction and diffusion algorithms applicable in a 4D grid layout.
    Downloads: 1 This Week
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  • 24
    The JCAMP-DX project is the reference implemention of the IUPAC JCAMP-DX spectroscopy data standard.
    Downloads: 0 This Week
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  • 25
    This project has moved. Please follow the WWW link below.
    Downloads: 0 This Week
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