104 projects for "java-orm" with 2 filters applied:

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  • 1
    Protein Data Bank transformed into an SQL database with a very powerful search engine and a rich web interface. The engine combines chemical, sequence and 3D structure searches. The interface provides statistics, sequence and 3D structure alignments.
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  • 2
    Java Native Interface wrapper for the IUPAC International Chemical Identifier (InChI)
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  • 3
    Java Data Processing Project aims to manipulate text file containing scientific data such as time/intensity scan or spectrum. Jdpp provide large flexibility to read all possible time duration and date format. It is originally design to treat MS data.
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  • 4
    The development and curation of a range of XML-based tools for using Chemical Markup Language (CML), including XSD XML Schemas for validation, datatyping and constraining CML documents and XSLT Stylesheets for transforming, filtering and rendering.
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  • 5
    primeHandle is a set of data management tools in support of the PrIMe Initiative (http://primekinetics.org). primeHandle includes graphical user interfaces for searching through data collections, editing and submitting data to the PrIMe Data Depository.
    Downloads: 0 This Week
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  • 6
    Source code for the Chemical Informatics and Cyberinfrastructure Collaboratory project.
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  • 7
    NMRShiftDB
    NMRShiftDB is an open-source, open-access, open-submission, open-content web database for chemical structures and their nuclear magnetic resonance data.
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    Downloads: 6 This Week
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  • 8
    OpenOffice.org extension for creation and editing of chemical structures embedded into OOo documents
    Downloads: 0 This Week
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  • 9
    MetaPrint2D is a tool for predicting sites of xenobiotic metabolism.
    Downloads: 0 This Week
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  • 10
    QSAR is a project that aims to build a GUI that enables people to build quantitative structure activity (or property) relationship models. It will use parts of CDK (cdk.sf.net), JOELib (joelib.sf.net), R (www.r-project.org) and other projects.
    Downloads: 0 This Week
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  • 11
    A Java program to paint the experimental and theoretical data obtained of STM and AFM.
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  • 12
    Ever got confused while remembering all the various physical properties of all the standard 20 amino acids? Then use Amino Acid Finder!! It has a built-in database and contains information about all the physical properties and lets you to search them
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  • 13
    Goldify is a set of tools that allow automated addition of links into electronic documents. Its main purpose is to allow such addition of links into documents that wish to link to the IUPAC GoldBook (http://goldbook.iupac.org).
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  • 14
    JOELib/JOELib2 is a cheminformatics library which supports SMARTS substructure search, descriptor calculation, processing/filtering pipes, conversion of file formats, 100% pure Java, and interfaces to external programs (e.g. Ghemical) are available.
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    Downloads: 10 This Week
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  • 15
    Calculating 2D-Gray-scale bitmaps Calculation of a 3D-rotation-body form a detected area by using different image processing algorithms. Developed for the German Aerospace Center (DLR). Used Projects: Substance (GUI)
    Downloads: 0 This Week
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  • 16
    Grid-Enabled Molecular Simulation Repository (GEMS)
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  • 17
    User friendly PDB (Protein Data Bank) file editor with graphic user interface for protein crystallographers to expedite selective parallel edit / data extraction / analysis of their PDB files
    Downloads: 2 This Week
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  • 18
    Mathematics, Chemistry and Bio-informatics semantic knowledge editor and simulation environment. It should serve as interactive science learning program or science classroom notebook and workshop.
    Downloads: 0 This Week
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  • 19
    FreeLIMS  |  Free LIMS

    FreeLIMS | Free LIMS

    Laboratory Information Management System

    FreeLIMS is a Laboratory Information Management System ( LIMS ). Manage samples; create sample types from methods & parameters; easily generate reports & certificates; fine tune user rights. FreeLIMS is Open Source and Free.
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    Downloads: 25 This Week
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  • 20
    The JCAMP-DX project is the reference implemention of the IUPAC JCAMP-DX spectroscopy data standard.
    Downloads: 0 This Week
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  • 21
    4-Dimensional Cell Simulator (4DiCeS) is a framework on hybrid (stochastic and deterministic) modeling and simulation of (whole) cell environments in 4D. The framework may incorporate any reaction and diffusion algorithms applicable in a 4D grid layout.
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  • 22
    A Java-based tool to visualize, integrate and analyze LC-MS/MS proteomics data.
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  • 23
    The ChemSense Studio software supports the creation and sharing of text, images, graphs, drawings, and storyboard animations of chemical processes. The ChemSense Animator can be run as a separate, stand-alone application. See http://chemsense.sri.com
    Downloads: 0 This Week
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  • 24
    The aim of the project is to provide open source collection of algorithms in the field of spectroscopy: data handling and processing, modeling and artificial intelligence tools.
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  • 25
    Chemical Calculator that can calculate various aspects of compounds. The programs main features are: * Get information about an element * Calculate the amount of moles of an element * Calculate the Empirical and Molecular formulas of a compound
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