Showing 586 open source projects for "drcom-for-linux"

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  • 1
    Grid-based Coupled Electron and Electromagnetic field Dynamics (GCEED) is an open-source software package for massively parallel first-principles calculations of electron dynamics in real time and real space. The program codes are written in the Fortran 90/95 language with MPI and OpenMP. Time dependent density functional theory (TD-DFT) calculations can be performed on 100,000 CPU cores of K Computer with high parallel efficiency.
    Downloads: 1 This Week
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  • 2

    XDrawChem

    XDrawChem is an application for chemistry drawing and analysis.

    XDrawChem is an application for drawing and analyzing chemical structures and reactions. Please visit the website for full details. Download source and binary releases here, and clone the source from GitHub at the external link above.
    Downloads: 47 This Week
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  • 3

    SciEx

    C++ code for object-oriented formulation of scientific experiments

    Scientific experiments are formulated as objects in C++ code. The project provides header files and libraries. Particular emphasis is put on electrochemical experiments.
    Downloads: 0 This Week
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  • 4
    Open Babel
    Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It's an open, collaborative project allowing anyone to search, convert, analyze, or store data from molecular modeling, chemistry, biochemistry, or related areas
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    Downloads: 811 This Week
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  • 5
    An open source workbench for chemo- and bioinformatics built on the Eclipse Rich Client Platform (RCP).
    Downloads: 7 This Week
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  • 6
    BioNLP-Corpora is a repository of biomedically and linguistically annotated corpora and biomedical data sources. There are many resources available in separate packages in this project.
    Downloads: 0 This Week
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  • 7
    Molecular Simulation Grid

    Molecular Simulation Grid

    Provides high performance computing power and state of the art tools

    MoSGrid focuses on the configuration and provision of Grid services for molecular simulations and annotation of the results with metadata and their provision for data mining and knowledge generation. It is based on Liferay technology togethe with gUSE.
    Downloads: 0 This Week
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  • 8
    Spglib is a C-library written for finding crystal symmetry. Symmetry operation, space group, etc, can be obtained using this symmetry finder. It is easy to include this library to your code. For more information, See, http://spglib.sourceforge.net/
    Downloads: 18 This Week
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  • 9
    Maltcms
    The Maltcms - Modular Application Toolkit for Chromatography Mass-Spectrometry is a JAVA API for preprocessing, alignment, analysis and visualization of data stored in open file formats used in Proteomics and Metabolomics research.
    Downloads: 0 This Week
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    Claims Processing solution for healthcare practitioners.

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  • 10
    orthos

    orthos

    Simulation of EPR spectra of nitroxide biradicals

    The program Orthos is developed to performed simulation (including nonlinear least-squares fitting) of EPR spectra of nitroxide biradicals. The program capabilities include simulation of rigid-limit and slow-motional spectra, of both isotropic and aligned samples. The spectra of multiple paramagnetic species, both bi- and monoradicals can be modeled. NB: Please note that now (as of Nov 2016) the distribution is being updated so that to improve reliability, OS-universality, and the quality...
    Downloads: 0 This Week
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  • 11
    PAScual is a data analysis suite for Positron Annihilation Lifetime Spectroscopy (PALS).
    Downloads: 0 This Week
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  • 12

    alkacalc

    Lye calculator for soapmaking

    AlkaCalc assists with the creation of soap recipes for either liquid (potassium hydroxide) or bar (sodium hydroxide) soaps by calculating the amount of lye needed to saponify any combination of soapmaking oils.
    Downloads: 0 This Week
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  • 13
    PyVib2 is a program for analyzing vibrational motion and vibrational spectra. It is an open source "all-in-one" solution for scientists working in the field of vibrational spectroscopy (Raman and IR) and vibrational optical activity (ROA and VCD).
    Downloads: 0 This Week
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  • 14
    DISCUS simulation package
    DISCUS is a set of programs to simulate the atomic structure of disordered materials and calculate experimental properties such as diffuse scattering or the atomic pair distribution function.
    Downloads: 0 This Week
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  • 15
    pyxaid

    pyxaid

    PYthon eXtension for Ab Initio Dynamics

    Downloads: 0 This Week
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  • 16
    WavePacket

    WavePacket

    Dynamics of quantum systems, controlled by external fields

    WavePacket is a program package for numerical quantum-mechanics of distinguishable particles. It can be used to solve single or coupled time-independent or time-dependent (linear) Schrödinger and Liouville-von Neumann-equations, as well as classical or quantum-classical Liouville equations. Optionally accounting for the interaction with external electric fields within the semiclassical dipole approximation, WavePacket can be used to simulate modern experiments involving ultrashort light...
    Downloads: 0 This Week
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  • 17
    LOOS

    LOOS

    Analyze molecular simulation data

    LOOS is a light-weight object oriented software library for creating new tools for analyzing molecular simulation data, written in C++. The main design goal is to allow casual programmers to easily implement new analysis methods. THIS PAGE IS NO LONGER UPDATED. Please see https://github.com/GrossfieldLab/loos for all recent developments
    Downloads: 1 This Week
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  • 18
    trj_cavity finds protein cavities throughout Molecular Dynamics (MD) simulation trajectories. The program works with files in PDB format, but it also can read/generate GROMACS compatible formats such as XTC. The same project can be compiled as a GROMACS tool or as a standalone version. Installation instructions are provided in the INSTALL file of the project and in https://sourceforge.net/p/trjcavity/wiki/Home/#ffad If you need support using this tool (or report bugs), please post it...
    Downloads: 4 This Week
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  • 19

    qcinteg

    Integrals for Quantum Chemistry

    This C library provides functions for evaluating basic integrals needed in quantum chemistry. It supports primitive cartesian Gaussian basis functions (GTO) of arbitrary angular momentum and is based on the Hermite Gaussian Expansion. The purpose of this library is to have a handy useful implementation.
    Downloads: 0 This Week
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  • 20
    orbkit (Moved to Github)

    orbkit (Moved to Github)

    A Modular Python Toolbox for Cross-Platform Post-Processing of Quantum

    PLEASE NOTE ORBKIT HAS BEEN MOVED TO https://github.com/orbkit/orbkit orbkit is a parallel Python program package for post-processing wave function data extracted from output files of MOLPRO (Molden File Format), TURBOMOLE (AOMix file format), GAMESS-US, PROAIMS/AIMPAC (wfn/wfx file format), and Gaussian (Output File and Formatted Checkpoint File) output files. Futhermore, an interface to cclib, a parser for quantum chemical logfiles, is provided. If you use orbkit in your work,...
    Downloads: 0 This Week
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  • 21
    RDKit

    RDKit

    Open-Source Cheminformatics and Machine Learning

    A collection of cheminformatics and machine-learning software written in C++ and Python. NOTE: the RDKit source code and downloads are now in github: https://github.com/rdkit/rdkit The core algorithms and data structures are written in C++. Wrappers are provided to use the toolkit from either Python or Java. Additionally, the RDKit distribution includes a PostgreSQL-based cartridge that allows molecules to be stored in relational database and retrieved via substructure and...
    Downloads: 8 This Week
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  • 22
    Periodic Table of Elements

    Periodic Table of Elements

    Periodic Table of Elements a quick reference tool

    Periodic Table of Elements is a quick reference tool that allows you a quick glance to get general information about an element. The program is for educational purposes.
    Downloads: 0 This Week
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  • 23
    RMG - Reaction Mechanism Generator
    Notice: RMG-Java is no longer in active development. Please find the latest version written in Python at http://reactionmechanismgenerator.github.io To see the website o the old Java version of RMG, visit http://rmg.sourceforge.net RMG (Java version) is an automatic chemical reaction mechanism generator that constructs kinetic models composed of elementary chemical reaction steps using a general understanding of how molecules react (currently limited to C, H, O, and S atoms).
    Downloads: 3 This Week
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  • 24
    pyMDMix

    pyMDMix

    Molecular dynamics with aqueous-organic solvent mixtures

    This python package aims to help people set up and analyze molecular dynamics simulations in aqueous-organic solvent mixtures. See D. Alvarez-Garcia et al. Journal of Medicinal Chemistry, 2014.
    Downloads: 0 This Week
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  • 25
    XR3FoodAnalyser

    XR3FoodAnalyser

    Analyze food ingredients!

    Comments: Confirm that the food you eat is health with this app.Including over 5000 ingredients!!! System Requirements: Java 1.8.0_45++ required.
    Downloads: 0 This Week
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