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JDIFF is a program that outputs the differences between two binary files, either in binary format or in human readable format (detailed or summarized) and then allows to reconstruct the second file from the first one and the diff-file.
xRecurseDiff is a small program that can rapidly traverse entire directory trees to show different version of the same files, for example to compare different version of the same project.
For every file in the first directory searches in the second for files having the same name. A report containing results is shown. A detailed diff output can be shown. Search can be case-insensitive and limited by a char filter.
Use your favorite diff utility with Rational Clearcase. Default diff utility that comes with Clearcase sucks. One can always use a better diffprogram like beyond compare. Ccdiff will allow you to do just that, use your favorite diff with Clearcase.
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Pardiff accepts the output of diff on stdin, converts it to a parallel (side-by-side) format, and writes it to stdout. It emulates the /PARALLEL option of the DIFFprogram of VMS.