Showing 9 open source projects for "fluorescence"

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  • 1
    Chooch

    Chooch

    Determine f'' and f' from X-ray fluorescence spectra

    A program for deriving anomalous-scattering factors from X-ray fluorescence spectra.
    Downloads: 0 This Week
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  • 2
    experix laboratory control system

    experix laboratory control system

    instrument control, data acquisition display and analysis

    ...Interfaces accessible via commands and scripts: file i/o modelled on stdio and stdlib; usb control and bulk transfers; socket operations; webcam; graphics via framebuffer. Applications (not all available yet for download) include: cell poker (like an atomic force microscope); tissue mechanical tester; fluorescence photobleaching; alternating laser excitation fluorescence; fluorescence intensity distribution analysis; iverilog simulation analysis.
    Downloads: 1 This Week
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  • 3
    Toolchain for quantification of fluorescence intensity and morphological parameters in single cells using microscope based cytometry.
    Downloads: 1 This Week
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  • 4

    Automatic cell lineage reconstruction

    Automatic segmentation and tracking for 3D time-lapse microscopy

    ...We demonstrate its (1) generality, by reconstructing cell lineages in four-dimensional, terabyte-sized image data of fruit-fly, zebrafish and mouse embryos, acquired with three different types of fluorescence microscopes, (2) scalability, by analyzing advanced stages of development with up to 20,000 cells per time point, at 26,000 cells min-1 on a single computer workstation, and (3) ease of use, by adjusting only two parameters across all data sets and providing visualization and editing tools for efficient data curation. Our approach achieves on average 97.0% linkage accuracy across all species and imaging modalities." ...
    Downloads: 2 This Week
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  • 5
    NanocalcFX

    NanocalcFX

    Open Source Data Evaluation Software

    NanocalcFX is a free and open source evaluation software for a simple yet comfortable solution to deal with thousands of transport kinetics measured with a fluorescence microscope or similar kinetics. Data can be imported from CSV or Excel files or using the dedicated image stack analyser (NISA). You can get sample data at the nanocalcFX homepage. Note that nanocalcFX is currently in a beta state.
    Downloads: 0 This Week
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  • 6
    MicrobeTracker
    A MATLAB-based software package for microbiological research designed to detect and outline bacterial cells in microscopy images and to analyze fluorescence signal inside them.
    Downloads: 0 This Week
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  • 7
    NOSE is a package for simulation of linear and non-linear optical and infrared spectra, including absorption, fluorescence, circular dichroism, pump-probe, photon echo and other.
    Downloads: 1 This Week
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  • 8
    A brand-new desktop environment for X11
    Downloads: 0 This Week
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  • 9
    Program to fit data from decay experiments, for example, a time-resolved fluorescence measurement. It handles multiexponential decays, and simultaneous fit of many measures. Instrumental response function must be provided.
    Downloads: 0 This Week
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