Search Results for "bio-bwa" - Page 14

ĄHola!, for "Hordes of Little Atoms," is a project to develop a lean, modular, scalable toolkit for massive simulations of particle (molecular) dynamics. It is written in C and Python to get the best balance between programmer and run time.

Virtual machine/emulator; "holding pen" for self-replicating programs written in custom RISC assembly-like language, evolving via random point mutations and periodic fitness-based cullings. Inspired (like Avida) by Thomas Ray's alife simulator, Tierra

Gnome-EMBOSS is an open-source application to help scientists handle DNA, RNA and protein sequences. It uses Gnome/GTK for the user interface and EMBOSS libraries for sequence handling routines. (See www.emboss.org for further info.)

A modular, database-backed system for 5 dimensional (5D) analytical biological microscopy and cell-based screening. Please note - we have moved. Please come visit us and download from our new site at http://cvs.openmicroscopy.org.uk

Distributed Genetic Programming SRVM (Simple Risc Virtual Machine) Distributed function approximator of nonlinear functions with automatic induction of machine code.

DSIM means "darwin_sim". DSIM is a project under GPL. DSIM tries to simulate the Darwin theory, by by generating entities, having some characteristics. Those entities belongs to one of the 6 species of the program. Each species has some properties a

DEODAS designs & analyzes consensus-degenerate oligonucleotide probes for biological research. DEODAS automatically designs and screens, probes against databases of known genes & stores the information in a searchable database.

This package is intended to control dilutions of proteins / lipids / detergents mixtures in a reproducible, easy and even fun way in order to produce protein cristals.

The bio-cpp project provides a C/C++ library for bioinformatics.

Parallel version of MUMMER v. 3.14, a genome-level alignment tool used to assemble complete genomes.

This approach will implement an artificial intelligence (AI) on the hexy robot developed by ArcBotics

The program structure is a free software package for using multi-locus genotype data to investigate population structure.

A CUDA parallel parser for nondeterministic grammars based on a Bison-generated GLR Parser. Parsing has been used to syntactically analyze programming language. Usually, parsing programming languages is deterministic, i.e., there exists exactly one valid way to syntactically interpret the input. In this project, non-deterministic parsing is used as means to predicting RNA secondary structures. In non-deterministic parsing, more than one syntactic interpretation is valid. This is where...

Biom is an open source project related to bioinformatics. Biom is started for needs of university project related to statistics for Sars corona virus. It can work with any genome sequence, nucleo or amino.

m0n0merhunter is a command line program for computing the most frequent delta masses of ultra high mass resolution and accurate mass measurements using mass spectrometer data.

AQUA is a suite of programs for Analyzing the QUAlity of biomolecular structures that were determined via NMR spectroscopy. AQUA was developed by Ton Rullmann and Jurgen Doreleijers in the NMR Spectroscopy Department, Utrecht.

Maximal Clique Motif Reduction (MCMR) is a software program for running and then combining the output of multiple motif finder programs, such as MEME, AlignACE and Weeder, into a set of consensus predictions with associated confidence rankings.

This project aims to develop various tools for artificial life and complex systems simulations: from the simulator itself to generic generation tools.

The open bicycle computer (oBiCo) is an outdoor computer to be mounted on your bike. We are providing an open source based plattform to ether use Linux based software or go with a small GPL'ed C++ OS (Booting in just 2 seconds)