Search Results for "linux shell" - Page 10
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Showing 1063 open source projects for "linux shell"
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QUASI is a toolkit to rapidly assess the quality of shRNA-Seq based data and call differential abundance using common statistical inference methods (DESeq, edgeR, baySeq).
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MonoFlow
A monolithic flow based programming application
... / environment is intended to be fully extensible. In the same way that GNU/Linux is monolithic and extensible. I intend it to comprise specifically of a stub (to start and stop the primary application) as a "kernel equivalent" and will wrap around the developer environment as an IDE / interpreter (in the same manner as a shell) for the time being. -
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viDrop
Universal video transcoder
viDrop is free video transcoding software for GNU/Linux and Windows operating systems. With its help you can easily convert your favourite movies or videos into format, playable on your Smarthone, Tablet, MID, Portable Media Player etc. -
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IPv6 CARE, "IPv6 Compliant Automatic Runtime Environment", provides an environment where applications instantly become IPv6-compliant ('patch' mode, see RFC6535). It can also generate a diagnosis about the IPv6 compliance of an application ('check' mode). It uses an LD_PRELOAD-based library injection technique.
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ExonFinder
A pipeline to extract novel cassette exons/retained-introns
ExonFinder provides a pipeline to extract novel cassette exons and novel retained-introns from the results of mapping cross-species ESTs against a target genome via blat. -
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TEA is a text editor that provides a wide range of text-processing functions (over 100) and the syntax highlighting. There are two branches of TEA: Qt-based and GTK-based.
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PolySim
Polymer simulation utilites
... to visualize with pymol. For specific non-pdb input/output of 2nd program there are convertation utils also available. Programs are expected to compile in gcc under cygwin or pure linux environment. Scripts to run many copies of program under pbs/torque cluster system are also available. -
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GRUB4USB
GRAND UNIFIED BOOT LOADER FOR USB
FOR WINDOWS USERS WHO WANT TO JUMP TO LINUX EASILY/PAINLESSLY WITH A FAST BOOTING USB FLASH DRIVE. LATEST VERSION AT www.grub4usb.com A simplified "FAMILY TREE"/"Ancestor" perspective: www.grub4usb.com for more. Introduction (from http://www.gnu.org/software/grub/) GRANDPA: GRUB is a Multiboot boot loader. It was derived from GRUB, the GRand Unified Bootloader, originally by Erich Stefan Boleyn. DAD: GRUB4DOS made it easier for Windows/DOS users, but was still unreliable; the boot... -
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The MOTET Cipher & SE Scrambler
A tiny, fast encryption tool in C
MOTET is a tiny, fast super-encipherment application written in C, featuring the new CSPRNG/stream ciphers MOTE and BEDBUG in each of their three variants, as well as the "gold standard" among ciphers, ISAAC. MOTET brings multiple levels of encryption, including a ciphertext-hash, a Vigenere mixing function, a choice of Caesar MOD or Caesar MIX ciphering on the primary key-stream, plus a deeply scrambled "outer shell" as a final super-encryption stage. A unique nonce IV guarantees that each... -
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SES Super-Encypherment Scrambler
SES brings back the uncrackable onetime pad, with a digital twist.
SES brings back the uncrackable onetime pad, with a digital twist. It is well known that a random key of message-length is the only provably unbreakable cipher. SES uses cryptographic strength pseudo-random keys of message-length for its many encipherments, in addition to offering true one-time pad capability for the intrepid. SES is built on ISAAC, Bob Jenkins' unbroken CSPRNG, a fast and simple stream cipher placed in the Public Domain in 1996. SES now gives you the ability to... -
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SLOCCount is an easy-to-use tool that counts Source Lines of Code (SLOC). It auto-determines the language(s) (inc. C, C++, Ada, Assembly, shell, COBOL, C#, Fortran, Haskell, Java, LISP/Scheme, Perl, PHP, Python, Ruby, SQL). It also estimates cost & time.
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precise-elementary
simple, beautiful, fast, friendly, fun, and all around amazing Linux
Based on the next generation of elementary OS. Lightweight and beautiful. All-new apps. A refined look. elementary is a team of dedicated developers, artists, and your everyday users who want to craft an incredible computing experience. We make elementary OS and many apps and give them to users to help bring this goal to reality. elementary is a software platform; a unified computer operating system. We have a commitment to a particular toolkit (GTK+) and support a preferred programming... -
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The aoetools are programs for users of the ATA over Ethernet (AoE) network storage protocol, a simple protocol for using storage over an ethernet LAN. The vblade program (storage target) exports a block device using AoE.
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STANTOR
Scada for Home Automation
Stantor is a SCADA for home automation/domotic project. It drives : k8061-K8055(USB), K8000(I2C), Arduino Mega and Uno, X10, 1-Wire, electricity meters, Webcam (motion), infrared remote controls. It uses WEB browser, smartphone, xHTML, SOAP, Websocket, HTML5 Apache, mySQL, PHP, javascript and Ajax. Stantor allows control of electrical equipments like boilers, shutters, lamps, pumps, etc...connected to the 220V/110 VAC. Gathering information of various kinds such as temperature, light,... -
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GDB-ILI extends the GNU debugger with a generic interface to various interpreter languages. Features: Data transfer from/to debugee, direct interaction in interpreter shell, extended breakpoints,... Support for Matlab(R) and GNU Octave is included.
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DracoLinux
Simple and flexible GNU/Linux distribution
Draco is an independently developed GNU/Linux distribution for i486 compatible computers, with focus on simplicity and flexibility. Draco has an distinct separation between the base system and third-party (provided by pkgsrc), the advantage of this approach is that the base system will work without third-party; And third-party applications are completely isolated from the base system, unable to break your system. -
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wEMBOSS is a Web interface for the EMBOSS software package for biological sequence analysis. Under wEMBOSS each user has a private workspace (UNIX home directory) on the server, where he can permanently store his data and organize them in projects. The companion suite wrappers4EMBOSS allows to integrate under EMBOSS a number of popular bioinformatic software suites as BLAST, CLUSTAL and MRS.
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ZintoriOS
Simple, Fast, Advanced... ZintoriOS. Made in Wellington, New Zealand
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regutils
regutils - Win9x registry tools in Unix C & INI file tools in Perl
Regutils is a collection of programs to help in managing the configuration of Windows software and systems. The utilities can be used to apply user and machine specific customizations on the fly as users log in or as machines are booted. They can also be used to identify and correct similarities and differences between software configurations. These may be helpful in debug situations or when consistency or differences need to be maintained. The regutils package was initially created... -
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EmulMultiFit
Simultaneously fit SAS data with polydisperse core-shell-shell spheres
Keywords: -simultaneously fit several SAXS and SANS data sets with polydisperse (Schultz-Zimm or Gaussian distribution f(R)) spherical core-shell-shell nanoparticles -analytical expressions are used for from factor F(Q) and its integral over f(R), no numerical integration required -absolute units -Mathematica is required via console (MathKernel) -Mathematica's local and global optimizers (simulated annealing, differential evolution, Nelder-Mead, ...) can be used -range for fit parameters... -
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Crosos Operating System
Crosos is a SubLinux Distribution
Crosos is a open-source OS. It is based on the Linux Kernel and mostly uses the same code in Ubuntu (but it has been derived from Debian) -
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Sqsh (pronounced skwish) is short for SQshelL (pronounced s-q-shell), a replacement for the venerable 'isql' program supplied by Sybase.
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XNDiff
X-ray and Neutron powder pattern simulation analysis
Keywords (XNDiff): -SAXS -SANS -absolute units -core (double)shell crystalline nanoparticles -with a parallelepidal shape -particle assemblies -powder and ensemble average -C/C++ -Unix -OpenMP -HPC Cluster Keywords (BatchMultiFit): -simultaneous fits for several SAXS and SANS curves with simulation data from XNDiff -SANS data can be smeared with dq values from experimental data sets or analytical functions -Mathematica console -local and global optimizers (simulated annealing... -
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Unetbootinbitti
Tool for creating live usb-drives and downloading distros
Tool for creating live usb-drives and downloading distros. This is an upgraded version of Unetbootin focusing on Bittix linux 9 and above and Linux Mint and Linux Mint debian. Has Distrowatch.com link etc. -
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The fstrcmp project provides a shared library for making fuzzy string comparisons, and also provides an fstrcmp command for use in shell scripts.