Showing 4 open source projects for "gene"

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  • 1
    cufCDS

    cufCDS

    Codon usage frequency (CUF) calculator of coding fasta sequences

    ...The following files are also produced: .fss, which reports the frequencies of codons used as start and stop signals .lss, which contains the list of start and stop codons of each gene. .cuf, which reports the total frequencies and the fraction of synonymous codons.
    Downloads: 0 This Week
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  • 2
    Arabidopsis Motif Scanner

    Arabidopsis Motif Scanner

    Scanner of cis-regulatory elements in Arabidopsis genome

    The major mechanism driving cellular differentiation and organism development is the regulation of gene expression. Cis-acting en-hancers and silencers appear to have key roles in regulating gene expression. Arabidopsis Motif Scanner was design to build gene networks by identifying the cis-regulatory elements position in the model plant Arabidopsis thaliana and by providing an easy interface to evaluate gene relations.
    Downloads: 0 This Week
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  • 3
    GEP is an evolutionary algorithm for function finding. This framework is a powerful way of expressing and coding genetic-like structures and quickly finding solutions through evolution by common genetic operators.
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  • 4
    A turn-based artificial selection simulation in C# for Windows (may be ported to Linux later). Players will buy and breed horses to race or sell over a number of game years. The breeding process will make use of an accurate gene inheritance system.
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