Search Results for "hpc"
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Showing 26 open source projects for "hpc"
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LAMMPS
Public development project of the LAMMPS MD software package
LAMMPS is a large-scale classical molecular dynamics simulator for modeling atoms, molecules, coarse-grained particles, and other particle-based systems. It is designed for high-performance computing and can run efficiently on desktops, clusters, and supercomputers. The software is widely used in materials science, chemistry, physics, nanotechnology, soft matter, and computational engineering. It supports many interaction models, including pair potentials, many-body potentials, reactive... -
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LFortran
Official main repository for LFortran
LFortran is a modern open-source (BSD licensed) interactive Fortran compiler built on top of LLVM. It can execute the user’s code interactively to allow exploratory work (much like Python, MATLAB or Julia) as well as compile binaries with the goal of running the user’s code on modern architectures such as multi-core CPUs and GPUs. LFortran is in alpha (it is expected to not work on third-party codes and users enthusiastically participate in bug reporting and fixing). -
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lockfree
A collection of lock-free data structures written in standard C++11
lockfree is a collection of lock-free data structures written in standard C++11 and suitable for all platforms - from deeply embedded to HPC. Lock-free data structures are data structures that are thread and interrupt-safe for concurrent use without having to use mutual exclusion mechanisms. They are most useful for inter-process communication and often scale much better than lock-based structures with the number of operations and threads. -
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Unified Communication X
Communication framework for data-centric high-performance applications
Accelerate Your Network Performance with UCX. Collaboration between industry, laboratories, and academia to create an open-source, production-grade communication framework for data-centric and high-performance applications. Unified Communication X (UCX) is an award winning, optimized production proven communication framework for modern, high-bandwidth and low-latency networks. UCX exposes a set of abstract communication primitives which utilize the best of available hardware resources and... -
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GASNet is a language-independent, networking middleware layer that provides network-independent, high-performance communication primitives including Remote Memory Access (RMA) and Active Messages (AM). It has been used to implement parallel programming models and libraries such as UPC, UPC++, Co-Array Fortran, Legion, Chapel, and many others.
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Thrust
The C++ parallel algorithms library
...It also provides a number of general-purpose facilities similar to those found in the C++ Standard Library. The NVIDIA C++ Standard Library is an open-source project; it is available on GitHub and included in the NVIDIA HPC SDK and CUDA Toolkit. If you have one of those SDKs installed, no additional installation or compiler flags are needed to use libcu++. Thrust is a header-only library; there is no need to build or install the project unless you want to run the Thrust unit tests. -
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Distributed MultiThreaded Checkpointing
Checkpoint/Restart functionality for Linux processes
...With the use of TightVNC, it can also checkpoint and restart X-Window applications. The OpenGL library for 3D-graphics is supported through a special plugin. It also has strong support for HPC (High Performance Computing) environments, including MPI and SLURM, through the github MANA project: https://github.com/mpickpt/mana -
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progrep
Utility to show live progress, status & stats for running simulations
...It shows % completed, time remaining, time elapsed, number of threads, MPI_Rank(if any), CPU usage & speed (FPS). The FPS measures may be used in benchmarking, e.g. while optimizing HPC algorithms for performance. progrep supports both single-threaded and parallel (multicore/multinode - e.g. OpenMP/MPI) jobs. progrep can also report for jobs running on remote hosts, e.g. jobs running on Linux Clusters. progrep works in client-server model. The server can be installed in your simulation source code with only 4 extra lines (API). ... -
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OpenMultiphysics
Application Integration for HPC Multiphysics
The OpenMultiphysics project is the home for community-driven development of application integration technologies designed to aid in the design and implementation of multiphysics simulation capabilities. Design and development in this project is driven by the Consortium for Open Multiphysics. Feel free to visit us at our GitHub site as well: https://github.com/IllinoisRocstar/IMPACT -
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X10
Performance and Productivity at Scale
...Both its modern, type-safe sequential core and simple programming model for concurrency and distribution contribute to making X10 a high-productivity language in the HPC and Big Data spaces. User productivity is further enhanced by providing tools such as an Eclipse-based IDE (X10DT). Implementations of X10 are available for a wide variety of hardware and software platforms ranging from laptops, to commodity clusters, to supercomputers. -
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CRAFT HPC Floating-point Analysis
CRAFT: Configurable Runtime Analysis for Floating-point Tuning
CRAFT (Configurable Runtime Analysis for Floating-point Tuning) for HPC (High-Performance Computing) uses binary instrumentation to perform runtime analysis of floating-point code, detecting cancellations and making precision level recommendations. NOTE: THIS PROJECT HAS MOVED TO GITHUB!!!! https://github.com/crafthpc/craft -
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Production Environment Tutor
Automatic re-build of your environment on another linux platform
Command line tool that coordinates downloading, recompilation, installation and building of environment modules. The tool is driven by simple INI files that keep track of dependencies between installed applications. Useful for HPC-like environments. -
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virtualbelgium
parallelized micro-simulation of large population
The VirtualBelgium project aims at developing understanding of the evolution of the Belgian population using simulation and considers various aspects of this evolution (demographics, residential choice, activity patterns, mobility, ...). It is based on a validated synthetic population for the country and is intrinsically multi-disciplinary. -
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Debian Unstable/testing alpha.
Pre-Alpha Console distro for high performance Linux computing.
Basic Debian INTEL/AMD HPC console/desktop multi purpose. Linux for software devs/QA and thin laboratory clusters. MIC hardware, NUMA and live network memory and full IPv6 are supported. Final alpha release features: ======== * Usb image * General debian repos * VM optimizations * Hugepages by default * CGROUPs optimized by default * ALSA * Latest Debugging / Baremetal kernels * Full Haswell and MIC support in test * Full optimized python support * Full optimized perl support * Java compliance * IPv6 full stack with IPsets * Multipath storage * Overclocking tools * Student/Developer scripts. ... -
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XNDiff
X-ray and Neutron powder pattern simulation analysis
Keywords (XNDiff): -SAXS -SANS -absolute units -core (double)shell crystalline nanoparticles -with a parallelepidal shape -particle assemblies -powder and ensemble average -C/C++ -Unix -OpenMP -HPC Cluster Keywords (BatchMultiFit): -simultaneous fits for several SAXS and SANS curves with simulation data from XNDiff -SANS data can be smeared with dq values from experimental data sets or analytical functions -Mathematica console -local and global optimizers (simulated annealing, differential evolution, Nelder-Mead, ...) can be used -range for fit parameters and further constraints between fit parameters -parallelized (typ. 4-8 threads) TODO (BatchMultiFit): -read and use errorbars from experimental data sets -allow different q-ranges for different data sets in the fits -rewrite and test in Python using e.g. the lmfit module: https://pypi.python.org/pypi/lmfit/ to get rid of Mathematica and to run it on HPC clusters -
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LaunchMON is a software infrastructure that enables HPC run-time tools to co-locate tool daemons with a parallel job. Its API allows a tool to identify all the remote processes of a job and to scalably launch daemons into the relevant nodes.
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CANPRIC, Modern ANPR SDK Engine
ANPR SDK
...Simplest API The smallest, simplest, fastest Modern ANPR SDK CANPRIC is a modern ANPR/LPR engine, which based on machine learning and high performance computing(HPC). The ambition of CANPRIC is leading the ANPR industry into intelligent times and using the HPC technique to get high speed of processing. -
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Kepler Monitoring
Kepler is a monitoring system for HPC clusters
Kepler is a monitoring system for HPC clusters : it allows users to monitor cluster elements like nodes, network devices and storage nodes. Analyse can be centered on jobs to determine performances and behaviours. -
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Cca-forum unifies the Common Component Architecture tools and tutorial. It includes the CCA specifications, the Ccaffeine framework for HPC, and related tools. These support multilanguage scientific and parallel computing.
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Brook+ is a high level C-like language with extensions for stream programming on different compute devices such as CPUs and GPUs. Supports an ATI CAL and x86 CPU backend. Keywords : GPGPU, GPU Computing, HPC
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A portable C++ library of multi-threaded STL algorithms (transform, accumulate...) using standard containers and iostreams. Thread, mutex, spinlock are templatized. Close to Intel Threading Building Blocks, HPC++ or PSTL. Idea of A.Stepanov and M.Austen.
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VL-1 is High Performance Computing Middleware designed for the domain experts/researchers/Teachers who want to focus more on their problem then finding out ways of how to implement their problem.
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ORC-OpenMP is an OpenMP patch package for ORC, which enables ORC as an OpenMP compiler for Linux/IA-64. It intends to provide a basic research environment for further researches on OpenMP and other HPC related topics.
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LabScripts
Everson Lab Script Coding
Collection of homebrewed scripts for controlling jobs on our University's SGE cluster. Some of these scripts will make use of hpc-sjm.
