Showing 5 open source projects for "bayesian network"

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    FamSeq

    Variant calling on the basis of pedigree information

    ...FamSeq accommodates de novo mutations and can perform variant calling at chromosome X. To accommodate variations in data complexity, FamSeq consists of three distinct implementations of the Mendelian genetic model: the Bayesian network algorithm, Elston-Stewart algorithm and Markov chain Monte Carlo algorithm. To make the software efficient and applicable to large families, we parallelized the Bayesian network algorithm that copes with pedigrees with inbreeding loops without losing calculation precision on an NVIDIA® graphics processing unit.
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  • 2
    A QGIS plugin to facilitate data processing for Bayesian spatial modeling. (doi: 10.1111/j.1600-0587.2010.06598.x) Alternative site: http://code.google.com/p/maps2winbugsplugin/
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  • 3
    BigBang/Horizon is a proteomics data analysis pipeline with focus on the shotgun LC/MSMS workflow.
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  • 4
    Bayesline is a Bayesian Network Framework based on the Valuation Concept of Shenoy and Shafer.
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  • 5
    DBNL

    DBNL

    Dynamic Bayesian Network Library

    DBNL is a cross-platform library that offers a variety of implementations of Bayesian networks and machine learning algorithms. It is a flexible library that covers all aspects of Bayesian netwoks from representation to reasoning and learning. It allows you to create simple static networks as well as complex temporal models with changing structure. It can handle highly non-linear dependencies between multivariate random variables. The particle based inference can answer arbitrary...
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