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  • 1
    ggraph

    ggraph

    Grammar of Graph Graphics

    ggraph adapts the Grammar of Graphics from ggplot2 for network and graph visualizations. It integrates with tidygraph/igraph data structures, providing a wide range of geoms, layouts (e.g. hive plots, circle packing), and layering methods tailored to hierarchical or relational data.
    Downloads: 1 This Week
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  • 2
    nichenetr

    nichenetr

    NicheNet: predict active ligand-target links between interacting cells

    nichenetr: the R implementation of the NicheNet method. The goal of NicheNet is to study intercellular communication from a computational perspective. NicheNet uses human or mouse gene expression data of interacting cells as input and combines this with a prior model that integrates existing knowledge on ligand-to-target signaling paths. This allows to predict ligand-receptor interactions that might drive gene expression changes in cells of interest. This model of prior information on...
    Downloads: 3 This Week
    Last Update:
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