Search Results for "text analysis"

OpenMed is an open-source healthcare AI and medical NLP toolkit designed to turn clinical text into structured insights using transformer-based models and production-oriented interfaces. Its core purpose is to provide specialized medical entity extraction, PII detection and de-identification, assertion-aware analysis, and related healthcare text processing capabilities without locking users into a proprietary platform. The project includes a curated registry of more than a dozen medical NER models focused on areas such as diseases, drugs, anatomy, genes, and protected health information, and it is built to support both research and deployment scenarios. ...

Sweetviz is an open-source Python library that generates beautiful, high-density visualizations to kickstart EDA (Exploratory Data Analysis) with just two lines of code. Output is a fully self-contained HTML application. The system is built around quickly visualizing target values and comparing datasets. Its goal is to help quick analysis of target characteristics, training vs testing data, and other such data characterization tasks. Shows how a target value (e.g. "Survived" in the Titanic dataset) relates to other features. ...

...QUAST computes several well-known metrics, including contig accuracy, the number of genes discovered, N50, and others, as well as introducing new ones, like NA50 (see details in the paper and manual). A comprehensive analysis results in summary tables (in plain text, tab-separated, and LaTeX formats) and colorful plots. The tool also produces web-based reports condensing all information in one easy-to-navigate file. QUAST and its three follow-up papers (MetaQUAST, Icarus, QUAST-LG) papers were published in Bioinformatics; the last paper (WebQUAST) is out in Nucl Acid Research.

PDF Combiner is a user-friendly open source free to use, GUI-based tool for combining, pdf to excel, pdf to word, image to pdf, zip, unzip annotate and splitting PDF files. It is easy to use, supports multiple file insert and delete and process, and allows you to adjust the order of files before combining.

Indexmeister reads a variety of formats (.tex, .docx, .epub, and others) and suggests keywords for indexing. The included program Imbrowse provides a semi-automatic interface to rapidly add index tags to multi-file latex documents.

DSTK - DataScience ToolKit is an opensource free software for statistical analysis, data visualization, text analysis, and predictive analytics. Newer version and smaller file size can be found at: https://sourceforge.net/projects/dstk3/ It is designed to be straight forward and easy to use, and familar to SPSS user. While JASP offers more statistical features, DSTK tends to be a broad solution workbench, including text analysis and predictive analytics features. ...

Capabilities of CorNetMap: 1. Read data as tab-delimited text file. Can be used for analysis of any data set beyond gene expression. 2. Capable of both two-dimensional and multidimensional data analysis. 3. Calculate Pearson correlation and cross-correlation for analysis data with phase difference. 4. Generate correlation Heat-map and draws network map. 5. Save correlation data as text file.

Processing of smallRNA-Seq data to gather biologically relevant information requires application of multiple statistical and bioinformatics tools from different sources, each focusing on a specific step of the analysis pipeline. The analytical workflow can be challenging for the continuous interventions by the operator, a critical factor when large numbers of datasets need to be analyzed at once. To allow a flexible and comprehensive analysis of smallRNA-Seq data we designed a novel modular pipeline, called iMir, integrating multiple open source modules and resource in an automated workflow, devising different statistical approaches to analyze data rigorously. iMir comprises also a Graphical User Interface (GUI), so that the pipeline is particularly suited for biologist and early stage bioinformaticians and produces both graphics and text outputs.

Plotmeister is a data exploration tool. It parses your ASCII data and generates a simple (text-based) table format. You can modify this table and eventually create nice looking figures.

iDocs is a intellectual document work flow with text mining options project.