Showing 2 open source projects for "genes"

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    OpenMed

    OpenMed

    Open source healthcare AI

    ...Its core purpose is to provide specialized medical entity extraction, PII detection and de-identification, assertion-aware analysis, and related healthcare text processing capabilities without locking users into a proprietary platform. The project includes a curated registry of more than a dozen medical NER models focused on areas such as diseases, drugs, anatomy, genes, and protected health information, and it is built to support both research and deployment scenarios. OpenMed can be used in three main ways: as a simple Python API for scripts and notebooks, as a Docker-friendly FastAPI service for backend integration, and as a batch-processing system for multi-document workflows.
    Downloads: 12 This Week
    Last Update:
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  • 2
    QUAST

    QUAST

    Quality Assessment Tool for Genome Assemblies

    ...For the most up-to-date description, please visit http://quast.sf.net. Below are just some highlights. QUAST computes several well-known metrics, including contig accuracy, the number of genes discovered, N50, and others, as well as introducing new ones, like NA50 (see details in the paper and manual). A comprehensive analysis results in summary tables (in plain text, tab-separated, and LaTeX formats) and colorful plots. The tool also produces web-based reports condensing all information in one easy-to-navigate file. ...
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    Downloads: 60 This Week
    Last Update:
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