Showing 2 open source projects for "border"

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    chipexo

    model based analysis of ChIP-exo data

    ...MACExo has the following four steps: 1) sequencing data normalization and bias correction; 2) signal consolidation and noise reduction; 3) single nucleotide resolution border detection using Chebyshev Inequality; and 4) border matching using Gale-Shapley’s stable matching algorithm. When applied to yeast Reb1 and human CTCF ChIP-exo data, MACE is able to define TFBSs with higher sensitivity, specificity and spatial resolution, as evidenced by multiple criteria, such as motif enrichment, sequence conservation, nucleosome positioning, and open chromatin states.
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    ExoticCAD is a simple garden designing program, where you arrange plants on a map and then see it realised as a 2D plant border or a 3D walkthrough. To add new plants, just import a 2D image of it.
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