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Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools
...The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm.
VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/
Calculates Natural Product(NP)-likeness of a molecule, i.e. the similarity of the molecule to the structure space covered by known natural products. NP-likeness is a useful criterion to screen compound libraries and to design new lead compounds.
Maven dependancy:
<dependency>
<groupId>uk.ac.ebi.cheminformatics</groupId>
<artifactId>NP-Likeness</artifactId>
<version>2.1</version>
</dependency>
Required repository:
<repositories>
...
YARFRAW is an open source Java API library for working with RSS/RDF/ATOM feeds. It offers an unified data model in builder style to help developers to build and to read feeds. It currently supports RSS 0.9x, RSS 1.0, RSS 2.0 and Atom 1.0/0.3
Atera all-in-one platform IT management software with AI agents
Ideal for internal IT departments or managed service providers (MSPs)
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Feed'n Read is an open Java based newsfeed reader. It is powered by the Sun ROME syndication framework and supports RSS 0.90, 0.91, 0.92, 0.93, 0.94, 1.0, 2.0, ATOM 0.3 and 1.0). Intuitive, fast and responsive ui using eclipse technologies (JFace / SWT)