Search Results for "data structures c" - Page 2
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Showing 181 open source projects for "data structures c"
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GMOL
A tool for 3D genome structure visualization
GMOL is an application designed to visualize genome structure in 3D. It allows users to view the genome structure at multiple scales, including: global, chromosome, loci, fiber, nucleosome, and nucleotide. This software was built upon the pre-existing Jmol package by Prof. Cheng's group. The software is developed in Prof. Jianlin Cheng's Bioinformatics, Data Mining and Machine Learning Laboratory in the Computer Science Department at the University of Missouri - Columbia, USA. The project... -
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X10
Performance and Productivity at Scale
X10 is a class-based, strongly-typed, garbage-collected, object-oriented language. To support concurrency and distribution, X10 uses the Asynchronous Partitioned Global Address Space programming model (APGAS). This model introduces two key concepts -- places and asynchronous tasks -- and a few mechanisms for coordination. With these, APGAS can express both regular and irregular parallelism, message-passing-style and active-message-style computations, fork-join and bulk-synchronous... -
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====== OIL (Object Introspection Library) for C++ ====== Aims at Facilitating the Object Introspection Capabilities for C++ Developers. The Goals is to be able to display and modify the contents of any given C++ Object at run time.
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DSTK - Data Science TooKit 3
Data and Text Mining Software for Everyone
DSTK - Data Science Toolkit 3 is a set of data and text mining softwares, following the CRISP DM model. DSTK offers data understanding using statistical and text analysis, data preparation using normalization and text processing, modeling and evaluation for machine learning and algorithms. It is based on the old version DSTK at https://sourceforge.net/projects/dstk2/ DSTK Engine is like R. DSTK ScriptWriter offers GUI to write DSTK script. DSTK Studio offers SPSS Statistics like GUI... -
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PDFReporter
Generating documents and reports, offline enabled and reliable.
The library is a fork of the popular open source Jasper Reports and supports the common features provided by Jasper Reports, but offline and for mobile apps. The PDFReporter library supports iOS, Java and Android library. For your document and report design you use the PDFReporter Studio where you can visualize your data. If you want to use the library commercially please visit our official webpage. -
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This site hosts the source code for C++ version of the Broker for SBW, NOM module, advanced simulation suite, analysis applications and model editors.
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StoryParser
A set of tools and libraries to help with writing eBooks
A set of tools and libraries (available for C# and Java) that help with writing fiction and non-fiction drafts and then produce ePUB and Kindle eBooks. With these tools/libraries, drafts, written in HTML, can be analyzed to help with writing. such as generating outlines and associating scenes with keywords. When done writing, the tools/libraries can be used to make publishable eBook, automatically producing additional material, such as Table of Contents and Title Pages. -
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Bias is a cross-platform versatile information management application / Organizer
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ParTools
Support for manual parallelization of sequential C programs.
ParTools allows the interactive analysis of a C program execution profile and data dependencies to facilitate the discovery and selection of suitable parallelization candidates in a manual parallelization process. The flow does not assume any specific parallelization technique, thus it can be broadly applied. The original (serial) C source is automatically annotated to trace the execution profile and data dependencies at run-time. -
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LionScripts Real Path Changer-Windows
LionScripts' Real Location Changer is a multi-purpose software
LionScripts Real Location Mover is Saves your precious SSD Disk Space or a Partition's Disk Drive Space by freeing up files and folders from source directory and Seemlessly links the Source Files and Folders with the Destination with Windows Native Support. Resulting makes your Windows Computer faster by freeing up the unwanted space with no fear of Data Loss. -
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DSTK - DataScience ToolKit
DSTK - DataScience ToolKit for All of Us
...Of course you may specify JASP for advanced data editing and RapidMiner for advanced prediction modeling. DSTK is written in C#, Java and Python to interface with R, NLTK, and Weka. It can be expanded with plugins using R Scripts. We have also created plugins for more statistical functions, and Big Data Analytics with Microsoft Azure HDInsights (Spark Server) with Livy. -
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MOIRAI
Simple Scientific Workflow System for CAGE Analysis
Cap analysis of gene expression (CAGE) is a sequencing based technology to capture the 5’ ends of RNAs in a biological sample. After mapping, a CAGE peak on the genome indicates the position of an active transcriptional start site (TSS) and the number of reads correspond to its expression level. CAGE is prominently used in both the FANTOM and ENCODE project. MOIRAI is a compact yet flexible workflow system designed to carry out the main steps in data processing and analysis of CAGE data.... -
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Card Raytracer Benchmark
Short C++/Java/C#/Python benchmark
This is a short C++/Java/C#/Python benchmark. Based on Paul Heckbert's sources. Thank you Paul! -
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Mauve computes and interactively visualizes genome sequence comparisons. Using FastA or GenBank sequence data, Mauve constructs multiple genome alignments that identify large-scale rearrangement, gene gain, gene loss, indels, and nucleotide substutit
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Phanto_maJ
build three dimensional structure
PhantomaJ is a software which aims to help users designing complexe three dimensional structures and building phantom banks. This software, implemented as an ImageJ plug-in, has been designed to be intuitive. PhantomaJ is thus "ready to use" for most users, but advanced users can choose to modify specific parameters such as intersection mode, intensity decrease function or virtual real three dimension. In addition, adding a new "basic form" consiste for advanced users to write two short... -
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Library of various Java Swing user interface components, with emphasis on views and editors for complex data structures, like collections, sets, lists, maps, graphs, and matrices.
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JBerd
Java tools for decoding and manipulating BER encoded ASN.1 Files
A simple Java ASN BER decoder and profiler A tool for easy manipulation of BER encoded files. An "awk" for ASN.1 BER (for Unix people) or maybe a "notepad" for ASN.1 BER (for Windows people). Jberd (Java BER decoder) is a lightweight BER decoder and associated tools for interpreting and processing BER encoded ASN.1 files. The following facilities are provided: • JBerd Profiler. A tool for profiling the contents of BER encoded files • JBerd Flattener. A tool for converting BER... -
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scipion-xmipp
Image processing framework to integrate EM software packages.
Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated... -
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Software Engineering Environment(SEE) is a general frame to customize and manage information. The default information set is the data for software development. Users can manage tables like Problem Reports, Change Requests, Working Log and Plans, Testing Cases, etc. It is written in servlet and data are saved in XML. Any data structures can be added and customized.
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Group Expense Manager
A Java based tool to calculate individual share in group expenses
This tool can be used when you want to calculate how much you need to give or get from other group members. For example 5 people go out on a trip.Say person A,B,C,D,E. And Expenses are like: 1. Trip road cost : 2000 bucks (A paid 1000,B paid 500,C paid 500) 2. A,B had snacks : 50 bucks (A paid 50) 3. B,C,D had drinks : 150 bucks (B paid 150) 4. hotel cost : 2500 bucks ( C paid 2500) Here A,B,C,D,E are added to person list file. There are 3 different... -
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Chordalysis
Log-linear analysis (data modelling) for high-dimensional data
...However, due to its exponential nature, previous approaches did not allow scale-up to more than a dozen variables. We present here Chordalysis, a log-linear analysis method for big data. Chordalysis exploits recent discoveries in graph theory by representing complex models as compositions of triangular structures, also known as chordal graphs. Chordalysis makes it possible to discover the structure of datasets with thousands of variables on a standard desktop computer. Associated papers at ICDM 2013, ICDM 2014 and SDM 2015 can be found at http://www.francois-petitjean.com/Research/ YourKit is supporting Chordalysis open source project with its full-featured Java Profiler. ... -
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The aim of the cardiac atlas project is to establish a structural and functional atlas of the heart. This project is funded by the NIH grant and led by the University of Auckland, New Zealand.
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Simulates a biologically diverse tropical island, and the ape inhabitants cognitive processes. For MacOS X, iPad, Windows and Linux. Features a non-polygonal graphics engine and a command-line version
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** Deprecated ** Important! All of the software on this web site has been deprecated, and has not been maintained since 2014. All of this software is now being maintained on Github - and can be obtained from https://github.com/jpaulm . Changes and enhancements are still ongoing, and while older software should still work, newer features described in the literature will not be available in SourceForge. The old license was the Artistic license - the software is now in process of...
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Graphical Grammar Studio
An user friendly grammar tool for natural language processing tasks
Full documentation with tutorials is included in the download package. Graphical Grammar Studio is a tool for applying grammars which behave as words acceptors/consumers and annotators. GGS grammars can be used to find and annotate sequences of words which respect certain conditions, in a given input. Its purpose is for creating NLP tools like phrase chunkers, named entity finders, pronoun co-reference solvers etc. A grammar is represented by a state machine which can be visualized, edited...
