Search Results for "computing" - Page 12
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1291 projects for "computing" with 1 filter applied:
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Mpaxs
Transparent Local and Remote Parallelization for Java
Mpaxs provides a simple abstraction for executing Callables and Runnables either locally within the same Virtual Machine, on the same host via RMI, or on remote machines, also via RMI. It supports launching of new compute hosts via an extensible API, currently featuring local compute host launching and grid compute host launching using the DRMAA API. -
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alignlib is a C++ library for computing and manipulating sequence alignments of protein sequences. Most of the functions and classes are exported to python thus permitting easy scripting of complex tasks. Alignlib has moved to github (https://github.com/AndreasHeger/alignlib)
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GXP is a parallel/distributed shell, plus a parallel task execution engine that runs your Makefile in parallel on distributed machines. Very easy to install (no need to compile. install it on YOUR machine and use it on ALL machines).
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FreeTrade
A CORBA TradingService
Register and look up services by interface type and (optionally) desired properties. Also includes a Type Repository. There is, as yet, no attempt at federation and no access control. -
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gridrpcdm
Library implementing the GridRPC and GridRPC DM OGF stantards.
This library is a common implementation of both the Open Grid Forum GridRPC API _and_ GridRPC API Data Management standards. It is completely modular and already supports middleware modules for DIET and Ninf, as well as data manager modules for iRods, OwnCloud, rsync, scp. The installation is made easy with cmake and testing examples can be launched in a one line command. -
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FreDec
Parallelized FREquency DEComposer algorithm
...After selection of the initial frequency candidates, the algorithm passes through all their possible combinations and estimates their multi-frequency statistical significance. In the end, it prints out the set of largest frequency tuples that were still found significant. The GPU computing is implemented through CUDA and brings a significant performance increase. It is still possible to run FreDec solely on CPU, if no suitable GPU device is available in the system. See the details of the underlying theory in Baluev 2013, MNRAS, V. 436, P. 807 The description of the algorithm itself can be found in arXiv:1309.0100. ... -
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Sqlcached is a memory cache daemon, inspired by memcached, but offering more granular control by using SQL interface instead of key-value pairs.
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QuickServer is an open source Java library/framework for quick creation of robust and multi-threaded, multi-client TCP server applications. With QuickServer one can just concentrate on just the application logic/protocol on hand.
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PASHA: Parallelized Short Read Assembly
One of the fastest parallel short read assemblers for large genomes.
...Taking advantage of both shared-memory multi-core CPUs and distributed-memory compute clusters, PASHA has demonstrated its potential to perform high-quality de-novo assembly of large genomes in reasonable time with modest computing resources. Our evaluation using three small real paired-end datasets shows that PASHA is able to produce better assemblies with comparable genome coverage and mis-assembly rates compared to three leading assemblers: Velvet, ABySS and SOAPdenovo. Moreover, PASHA achieves the fastest speed for all three datasets on a single CPU. ... -
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GISBox by Citiviz
Ready-to-use appliance for GIS, Data Mining and Analysis, Modelling...
GISBox by Citiviz is a ready-to-use virtual appliance containing an assortment of powerful, free and open source GIS, Data Mining and Analysis, Modelling and Programming software and packages. The pre-configured and tested GISBox allows you to try and use in few minutes a variety of software used by data scientists, engineers, physicists, mathematicians, geomatics engineers, and geographers from around the globe, without installing anything more than once the Oracle VirtualBox™ software... -
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Handles Hexahedral, Tetrahedral, Quadrilateral, and Triangle meshes. Lagrangian, Hierarchic, and Monomial finite elements. Interface to PETSc solvers, adaptive mesh refinement, and extreme portablility.
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Hellsing
Distributed JavaScript Engine
Hellsing is a distributed JavaScript engine. -
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PBS Cluster Viz is a project to display information useful to admins and users about a computing cluster managed by a PBS-compatible resource manager. Information includes load and job distribution. Interactive as well as static output is available.
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Java/C Comparative Benchmarks
Java and C Comparative Performance Benchmarks
...No language libraries were used to avoid implementation differences. Some of the benchmarks are also implemented in Python and Scala. There are benchmarks for bit twiddling, numerical computing, data structure manipulation, concurrent computing, callouts to native libraries, and, graphics processing units (GPU) utilization. -
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ParaSim
Parallelized calculation of molecular similarities
Diversity assessments and comparisons of large compound databases require calculating similarities of millions of compounds in an affordable time. ParaSim addresses this challenge by parallelizing the calculations according to the number of computing cores available on a single machine. It is optimized for the throughput of very large numbers of query structures against very large numbers of reference structures. As as special feature, ParaSim allows to store and and to access frequently queried datasets as persistant objects in memory for short response times. ParaSim calculates chemical similarities based on binary structural fingerprints. ... -
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Portable Linux
Portable Ubuntu Linux for Scientific Computing
...Swap out the root.disk with the ones provided here. Overview LAMP stack running on localhost (127.0.0.1). Scientific, productivity & media packages include R (Rattle Data Miner), GridEngine, Condor, cooperative computing tools, WINE, LibreOffice, Evolution, Clinica, Neuro Debian Desktop, PsycoPy, OpenVibe, 3DSlicer, Paraview, Openshot. Cheers, Gregory Remington -
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NOTE: NEWEST FILES AT http://www.schedmd.com/#repos ---------------------------------------------------------------------------------------------------------------------------- SLURM is an open-source resource manager designed for Linux clusters.
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LARA
Lightweight Architecture for boundedly Rational Agents
For the purpose of policy simulation in coupled social-ecological systems (e.g. energy supply), a credible modelling of actors – especially citizens – and their decision processes is needed. This requires a framework capable of handling high numbers of heterogeneous agents (several hundreds of thousands). LARA (Lightweight Architecture for boundedly Rational Agents) meets these requirements and fills the gap between frameworks without built-in psychological foundations and full-fledged... -
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ShoX is a scalable simulator for wireless networks written in Java. It is easy to install, configure and use, so that reliable and expressive scientific results can be gathered in a short time. Documentation: http://sourceforge.net/apps/mediawiki/shox
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MyZone Social Network
peer to peer social network
MyZone is a peer to peer social network that supports almost all features common in Facebook and Google+. In addition you can share unlimited mp3s and mp4s with your friends. MyZone does not downgrade the resolution of your photos and all established connections are encrypted using state of the art encryption techniques. MyZone is designed to be resilient towards cyber attacks especially DDoS attacks and government imposed censorships. MyZone should be an interesting social networking... -
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galaxyPhotometrySimulator
Set of scripts to perform galaxy photometry simulations.
This project contains a set of python scripts to perform SExtractor galaxy photometry simulations. It uses Galfit to simulate the galaxies and SExtractor for the photometry. It is defined to be used also with distributed computing and with Condor. No very well documented yet. Developed for my PhD. -
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HADOS
High Availability Distributed Object Storage
HADOS is a server software for storing files in a cluster of server. The goal is to handle high availability by storing copy of the same file on several nodes. HADOS provides RESTFUL APIs to easily store, check or retrieve files. Using the powerful cluster APIs you can retrieve the files whatever the node that hosts it. To avoid any single point of failure, it is possible to apply a request to any node of the cluster, there is no master node. -
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This is an ALPHA version - the RELEASE version is now on github - https://github.com/fimtra/datafission.
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...More information is available at http://xdmod.sourceforge.net/ UBMoD is a data warehouse and web portal for mining statistical data from resource managers in high-performance computing environments. UBMoD presents resource utilization over set time periods and provides detailed interactive charts, graphs, and tables.
