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* PubMed ID: 29562348
* DOI: 10.1093/nar/gky175
-> PLEASE MOVE OR MAKE A COPY OF 'DATA' FOLDER INTO YOUR INTENSIVE TEST FOLDER (I.E. LINUX, MAC OR WINDOWS SPECIFIED FOLDER) TO ALLOW THE PROGRAM TO FIND THE PREDESIGNED DATA.
* UPDATE NOTE:
-> Sep-1-2020: add an update for Ubuntu-20.04. You will need Boost library installed (sudo apt-get install libboost-all-dev)
-> Mar-7-2018: revise header terms in the output file
A probabilistic prediction system of protein phosphorylation sites
...The sequence headers list the accession number of the protein sequence and the position numbers of known phosphorylation sites. Note that CRUMp may predict additional phosphorylation sites that have not been experimentally verified yet.
The testing dataset is from Biswas et al. 2010, http://www.biomedcentral.com/1471-2105/11/273/additional.
Frida is image analysis software. Frida was developed by the Johns Hopkins University Tissue Microarray Core Facility. It is open source and written in 100% Java. Frida makes use of functionality from the NIH's ImageJ application. Note: Frida was integr