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BrukerEyes is a cross-platform open-source package for Bruker datasets management. It helps scientists to explore their datasets easily. This project was supported by: European Union's Horizon 2020 research and innovation program under the Marie Sklodowska-Curie grant agreement No 813120 (INSPiRE-MED) © Institute of Scientific Instruments of the Czech Academy of Sciences.

ATOM is an OMERO client which allows automated import of image data into OMERO. ATOM is provided as is without any guarantees or warranty. The author is not responsible for any damage or losses of any kind caused by the use or misuse of the programs.

Auto PHLIP-ML automatically removes extraneous images from CLSM stacks. This iterative operation removes bias in the Otsu threshold calcualtion. Auto PHLIP-ML integrates with the image analysis program PHLIP by automatically creating the PHLIP-ML file.