Search Results for "app"
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Showing 20 open source projects for "app"
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Auth0 B2B Essentials: SSO, MFA, and RBAC Built InAuth0's B2B Essentials plan gives you everything you need to ship secure multi-tenant apps. Unlimited orgs, enterprise SSO, RBAC, audit log streaming, and higher auth and API limits included. Add on M2M tokens, enterprise MFA, or additional SSO connections as you scale.
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Enterprise-grade ITSM, for every businessFreshservice is an intuitive, AI-powered platform that helps IT, operations, and business teams deliver exceptional service without the usual complexity. Automate repetitive tasks, resolve issues faster, and provide seamless support across the organization. From managing incidents and assets to driving smarter decisions, Freshservice makes it easy to stay efficient and scale with confidence.
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Jmol
An interactive viewer for three-dimensional chemical structures.
Over 1,000,000 page views per month. Jmol/JSmol is a molecular viewer for 3D chemical structures that runs in four independent modes: an HTML5-only web application utilizing jQuery, a Java applet, a stand-alone Java program (Jmol.jar), and a "headless" server-side component (JmolData.jar). Jmol can read many file types, including PDB, CIF, SDF, MOL, PyMOL PSE files, and Spartan files, as well as output from Gaussian, GAMESS, MOPAC, VASP, CRYSTAL, CASTEP, QuantumEspresso, VMD, and many other... -
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SpecProc2Browser
Default Browser Support for SpecProc
Tired of opening results in Internet Explorer? Want to say goodbye to Internet Explorer? Then SpecProc2Browser is for you. This is a companion app for SpecProc (https://sourceforge.net/projects/specproc/) When configured it quietly runs at the end of each batch and opens your results files in your default web browser. Sadly there is a little bit more to it than that. You have to configure a web server on your PC, but that isn't as difficult as it sounds and there are instructions in the Wiki. -
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Cylindrical Alignment App
Arranges alignments in a rotating cylinder
The Cylindrical Alignment App is the successor to Cylindrical BLAST Viewer. Similarly, it arranges search or other comparisons, against their "axis". Searches can be made by Basic Local Alignment Search Tool, ClustalW, or Gene Machine to name a few. This version does not require downloading or installing Java3D, and has more modern GUI features. -
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MicrobialChemostatSimulation
Computer Lesson and Simulation of Bacterial Chemostat and Chemotaxis
...It is coded in vb.net in MS Visual Studio 2022 Please note: After downloading and running the CheStatGen2b.exe file, also run the Setup file in the c:\Users\Public\CheStatGen2b directory. The 2a version has been updated to 2b. 2b has improved Graphs. The APP to runs under Windows 10. Download CheStatWH2aSETUP.exe gives a Width to Height ratio of 100 to 1000 in the Visual Simulations. -
Atera - an All-in-one platform for IT managementYour IT essentials, integrated & elevated. Take your IT management from automated to autonomous, download Atera's agent to start your free trial!
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KidneyExplorer
Kidney proteomics data explorer enables you to investigate diseases
KidneyExplorer enables you to interactively survey kidney proteomics datasets from different kidney disease models. Here you can download the corresponding SQL database dumps. The original website for the shiny app is: https://kidneyapp.shinyapps.io/kidneyorganoids/ -
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MSP Builder 2
Converts text files (such as csv, tsv, txt) to MSP files
Take a list from a search and how do you use that as a search. Answer: As an MSP file. But how do you make one? Answer: With this app. Convert your csv etc files to MSP. You define the relationship (the mapping) and take it from there. Includes a couple of examples. -
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Cell Paint
cellPAINT allows users to create living illustrations of biology.
cellPAINT is a free-form painting app that allows users to create their own living illustrations of cellular landscapes. There are currently several prototypes available: --cellPAINT_coronavirus includes a newly-redesigned user interface, and molecular building blocks for coronavirus, blood plasma, and a simple human cell --cellPAINT_exo includes hand-painted sprites created by Julia Jimenez during an internship, and also allows input of custom sprites through Mesoscope --cellPAINT_VR is a 3D virtual reality version of cellPAINT, with molecular building blocks for a red blood cell cytoskeleton --cellPAINT_2D is the initial alpha release of cellPAINT, with building blocks for HIV, blood plasma, and a human T-cell. ... -
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MSP2MGF
Convert MSP files to MGF files - Only you know why
...Things you should know: Change what things in the MSP get mapped into a new name in the MGF in Settings. Anything not on the mapping list is mapped through unaltered. And if this doesn't mean anything to you then this probably isn't the app for you -
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LymPHOS2
LymPHOS2 Web-App
LymPHOS2 is a web-based Application at www.LymPHOS.org containing peptidic and protein sequences and spectrometric information on the PhosphoProteome of human T-Lymphocytes. - Nguyen, TD., Vidal-Cortes, O., Gallardo, Ó., Abian, J., Carrascal, M., LymPHOS 2.0: an update of a phosphosite database of primary human T cells. Database 2015, 2015. DOI: 10.1093/database/bav115 - Carrascal, M., Ovelleiro, D., Casas, V., Gay, M., Abian, J., Phosphorylation analysis of primary human T lymphocytes... -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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Peak List 2 MSP
Simple peak list to MSP file converter
...Command line arguments: /? displays help information - Start from here. There are a few of them. And if this doesn't mean anything to you then this probably isn't the app for you Happy MSPing -
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MGF 2 FOR-JSON
Conversion of MGF files to JSON format
Want to convert an MGF file to JSON format? This is the app for you, especially if you want to use the JSON file in the FOR-IDENT search program. If you don't know what MGF file, JSON format, FOR-IDENT search program is then this isn't the app for you. Happy conversion! -
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Specify Software
Biodiversity Database Platform
...A web browser application, Specify 7, is available on GitHub. In 2015, 450 biological collections worldwide use Specify Software for collections data management. An iPad app, Specify Insight is also available. -
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Mass Difference Calculator
Mass Difference Calculator with a Graph for MassLynx data
...Bring in a text file with reference masses and then paste in or browse in another file with a list of mass/intensity pairs. Then look at the best matching points and see what the difference between reference and data comes out as. This is a companion app to ResCalc3 -
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Deem
Analyze time-course data with significance tests, clustering, modeling
...Generate network models, including linear or non-linear models. Variable selection and optimization routines included. Written in Scala and R. The application is a cross-platform desktop app with a simple GUI and is fully functional currently. The app was and is developed at the University of Rochester (http://cbim.urmc.rochester.edu) under the GPL 3.0 license. This is a fork of that project. -
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Prodar
Prodar searches the PDB for candidate protein structural alignments
...The input to the search is a protein backbone structure read from a standard (text) PDB file, and the results returned are based solely on structural similarity of the backbone without any regard to sequence information. Searches are extremely fast, searching the PDB (included in app) in less than a minute typically. Prodar identifies partial matches, such that a relatively small section of the query structure may be matched against sections of other structures in the PDB regardless of the relative size of the chains. The intention is that the tool automatically identifies common domains and motifs in otherwise dissimilar protein structures. ... -
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Cylindrical BLAST Viewer
Alignments in Rotating Cylinder / 3D
3D viewer which arranges BLAST hits and other bioinformatics-related alignments in a rotating, cylindrical display. Feedback appreciated. NOTE: requires Java3d installation. Superceded by Cylindrical Alignment App -
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CRIS-IE-Smoking
GATE based app to extract patient smoking status from free text
This application was developed by the NIHR Biomedical Research Centre at the Institute of Psychiatry and South London and Maudsley NHS Foundation Trust, in collaboration with the University of Sheffield. Its purpose is to identify the smoking status of a individual, based on text evidence in clinical notes. Currently, it classifies patients as 'current', 'past' or 'never'. It runs on the GATE infrastructure, available at http://gate.ac.uk/. Please contact richard.g.jackson@slam.nhs.uk for... -
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Gdraw
An app and a Perl library for genome feature drawing
Gdraw is an genome visualization tool, including a GUI application and a Perl library. The GUI application creates the drawing interactively. It can also create the drawing by import annotated sequence files (such as Genbank, EMBL). Its backend library can be used in user-written perl scripts to create highly customized drawings. -
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A sorting tool for Bioinformatics, Biochemistry and/or Molecular biology. This sorts nucleotide sequences aligned using "ClustalW". There may be a way to do this w/ original app, but someone I know couldn't figure out how - thus this project was born
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SIP (Sample Inventory Program) is a web application for managing mass quantities of lab samples. It is the first out-of-the-box Zope 3 app, and is field-proven. SIP may be used as-is, or as inspiration for other Zope 3 apps. (e.g. O/R RDBMS storage)
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