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  • 1
    Lipid Reporter

    Lipid Reporter

    Modifies csv files with a range of user defined filters.

    ** Updated for Windows 10** Lipid Reporter takes your plain old Progenesis QI search exports and allows you to manipulate them in a quick, safe, predictable way. Now with better support for Progenesis QI grouped output! Why muddle things up with Excel? Use Lipid Reporter instead. The supplied filters are all about Lipids. Add the category names, reject Ids that our outside of your favourite retention time range and lots more! This program is not produced by Nonlinear Dynamics and is not supported by Nonlinear Dynamics . Put all support questions through the Tickets and Discussion pages. ...
    Downloads: 0 This Week
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  • 2

    Peptide3D 2 MGF

    Converter for Peptide3D.xml to MGF

    Ever wanted to make an MGF file from a Peptide3D.xml output? If so then this is for you. Simply drag the xml onto the window and that's it. All the information needed is contained within the xml file. You get your mgf in the same place, same name, different extension.
    Downloads: 0 This Week
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  • 3
    GenomeRunner

    GenomeRunner

    Annotation and enrichment of Next-Gen sequencing data

    ...It performs annotation and enrichment analyses of user-provided genomic regions (SNPs, ChIP-seq binding sites etc.) against >6,000 (human genome) epigenomic features available from the UCSC genome browser. Input - any genome-wide data data in .bed format (tab-delimited text file with chrom, chromStart, chromEnd). Annotation analysis output - detailed annotation of each genomic region in input data. Used to prioritize individual genomic regions by the total number of epigenomic features they co-localize with. Enrichment analysis output - p-values of statistically significant co-localizations of input genome-wide data with genome annotation features selected for the analysis. ...
    Downloads: 1 This Week
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  • 4
    Protein Mass Spectrometry: cprobid is a software for identification peptides from MS/MS spectra. The output of this program is compartable with TransProteomic Pipeline software package (sashimi project).
    Downloads: 0 This Week
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