Showing 18 open source projects for "file-studio"

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  • 1
    MicrobialChemostatSimulation

    MicrobialChemostatSimulation

    Computer Lesson and Simulation of Bacterial Chemostat and Chemotaxis

    ...The simulation also demonstrates the bacterial mechanism of this utility. The Lesson also gives the Microbiology used in the simulation. It is coded in vb.net in MS Visual Studio 2022 Please note: After downloading and running the CheStatGen2b.exe file, also run the Setup file in the c:\Users\Public\CheStatGen2b directory. The 2a version has been updated to 2b. 2b has improved Graphs. The APP to runs under Windows 10. Download CheStatWH2aSETUP.exe gives a Width to Height ratio of 100 to 1000 in the Visual Simulations.
    Downloads: 0 This Week
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  • 2
    MSP Builder 2

    MSP Builder 2

    Converts text files (such as csv, tsv, txt) to MSP files

    Take a list from a search and how do you use that as a search. Answer: As an MSP file. But how do you make one? Answer: With this app. Convert your csv etc files to MSP. You define the relationship (the mapping) and take it from there. Includes a couple of examples.
    Downloads: 0 This Week
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  • 3
    MSP2MGF

    MSP2MGF

    Convert MSP files to MGF files - Only you know why

    ...displays help information /f anything following is a file you want to process. Things you should know: Change what things in the MSP get mapped into a new name in the MGF in Settings. Anything not on the mapping list is mapped through unaltered. And if this doesn't mean anything to you then this probably isn't the app for you
    Downloads: 3 This Week
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  • 4
    Peak List 2 MSP

    Peak List 2 MSP

    Simple peak list to MSP file converter

    ...It: takes lists from the clipboard (or drag and drop), sorts them by mass, normalises intensities, rejects below a cut off (that you define), adds MSP headers, puts the result back in the clipboard (or a file), has a command line interface so you can pass files in programmatically, has an api so you can call it in your own code (should you feel the urge). You: put a peak list in the clipboard from your favourite mass spec viewing software, append another list if you want (then you can merge lists together), copy-out or save the MSP that appears in the right hand box. ...
    Downloads: 0 This Week
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  • 5
    MGF2MGF CH

    MGF2MGF CH

    Convert mgf mass values to their nearest elemental formula

    ...Command line arguments: /? displays help information /w runs in windowed mode (the thing you are looking at now) /f anything following is a file you want to process. Things you should know: The elemental composition is not a sophisticated calculation.
    Downloads: 0 This Week
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  • 6
    MGF 2 FOR-JSON

    MGF 2 FOR-JSON

    Conversion of MGF files to JSON format

    Want to convert an MGF file to JSON format? This is the app for you, especially if you want to use the JSON file in the FOR-IDENT search program. If you don't know what MGF file, JSON format, FOR-IDENT search program is then this isn't the app for you. Happy conversion!
    Downloads: 0 This Week
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  • 7

    Peptide3D 2 MGF

    Converter for Peptide3D.xml to MGF

    Ever wanted to make an MGF file from a Peptide3D.xml output? If so then this is for you. Simply drag the xml onto the window and that's it. All the information needed is contained within the xml file. You get your mgf in the same place, same name, different extension.
    Downloads: 0 This Week
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  • 8
    Mass Difference Calculator

    Mass Difference Calculator

    Mass Difference Calculator with a Graph for MassLynx data

    A Mass Difference Calculator with a graph for MassLynx. Bring in a text file with reference masses and then paste in or browse in another file with a list of mass/intensity pairs. Then look at the best matching points and see what the difference between reference and data comes out as. This is a companion app to ResCalc3
    Downloads: 0 This Week
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  • 9
    GenomeRunner

    GenomeRunner

    Annotation and enrichment of Next-Gen sequencing data

    ...It performs annotation and enrichment analyses of user-provided genomic regions (SNPs, ChIP-seq binding sites etc.) against >6,000 (human genome) epigenomic features available from the UCSC genome browser. Input - any genome-wide data data in .bed format (tab-delimited text file with chrom, chromStart, chromEnd). Annotation analysis output - detailed annotation of each genomic region in input data. Used to prioritize individual genomic regions by the total number of epigenomic features they co-localize with. Enrichment analysis output - p-values of statistically significant co-localizations of input genome-wide data with genome annotation features selected for the analysis. ...
    Downloads: 4 This Week
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  • 10
    MFPaQ allows fast and user-friendly verification of Mascot result files, as well as data quantification from proteomics experiments. It supports several quantification approaches: isotopic labeling (SILAC, ICAT, ICPL, N14/N15...) and label-free.
    Downloads: 0 This Week
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  • 11
    ResCalc3

    ResCalc3

    Spectral resolution calculator for MassLynx

    ...ResCalc3 determines and reports the spectral resolution from a list of mass intensity pairs or MassLynx spectrum. The list can be either in the clipboard or in a text file. It is intended for use with data from either ToF or Quadrupole Instruments and reports the resolution of the most intense peak in the data. The resolution can be optionally compared to a threshold you specify and the result is displayed as Pass/Fail using a tick or cross alongside the resolution. You can choose to display a graph which shows the position and threshold result overlaid on the data. ...
    Downloads: 0 This Week
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  • 12
    A testing and proof of concept tool for querying multiple Internet data sources (primarily RDF) using various TDWG endorsed protocols.
    Downloads: 0 This Week
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  • 13
    Program designed to extract scientific names stored in PDF documents located on a web address, entering data into a table with Darwincore format. Additionally this application uses the "FindIT" web service located at http://www.ubio.org.
    Downloads: 0 This Week
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  • 14
    The software takes the initial gene correlations obtained as initial data, or from a Genepop file, and simulates the transgenerational transition of both the gene correlations and the fixation indices (Fls, Fil y Fis) for any number of generations.
    Downloads: 0 This Week
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  • 15
    Protein Folding by Genetic Algorithms uses evolutionary computing methods to predict a tertiary protein conformation using only the known aminoacid sequence of the protein.
    Downloads: 1 This Week
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  • 16
    BACMan is a Microsoft Access based application designed for the management and analysis of hybridization data related to the high throughput screening of large insert genomic libraries associated with physical mapping projects.
    Downloads: 0 This Week
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  • 17

    Project3dKidneyPrinted

    To build a 3d Printer that uses tine micro-pipette of some micrometers

    To build a 3d Printer that uses tine micro-pipette of some micrometers of radio to print from a 3d scheme a functional kidney, using steam cells,in 6 months.
    Downloads: 0 This Week
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  • 18
    Downloads: 0 This Week
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